XLOC_027353 (acot16)


Basic Information

Item Value
gene id XLOC_027353
gene name acot16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 25651720 ~ 25666835 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053815
TAAGGGGCATTTAGCCACAGATAACACAGCTCCTATGAACATTCGGTACTCAAAACCCTCCACTATGAACTGTGAGCACTGAAAGTAGGAGATGTCCTCTGTTAACTGTTCAGCCATGTCGAGGAATGGTGGACGAGAAGTTTCAGGTCGTCATAAAGAATTTACTGCCAAATCAAGAGGTAACGCTACACTCTCTACATCAGTCTGAAGATAAGGACTGCTGGGAGGCTTTTGGACACTATATCAGTGATGAACATGGAACAGTAACAGTGGCAAAAGATGAAAGTTTGGGAGGCACATATGAAGGGACAGAGCAGATGGGTTTGTTGTGGAGCCTGAGGCCTGTACCAGGAAGTCGACCTGCAATCAGGTTGCGCAAAACGAATTTACTCACACCAATGGTAGTTAATATATCAGTCTACAGTGGGCATACTTCTCAAGGATTCAGTCAGACTTCAGCGCTGGCCACTACTGTCACAGAGCGCTGGTACATGGCACCAGGTGTACAGAGGGTGGACATAAGAGAGAACGGAGTTCAAGGAACTTTATTTCTTCCCCCAGGCCCTGGGCCATATCCAGGAGTGCTGGATCTATGGGGAGGAAGTGCTGGATTGATTGAATATCGTTCTGCTCTGCTTGCATCTCATGGCTTTGCATGTATGGCCCTAGAATACACAACTCCAGCAAAGCTAAAAAAGACAGATGTTAATAATACATACTTTGAGAAAGCATACAAGATTTTGCAAAATCATCCGTTAGTACAGAAGGACAAGATGGCGATGCTTGGGTTGTGTTTTGGAAGTGCTATTACAT
>TCONS_00053816
GGGCATTTAGCCACAGATAACACAGCTCCTATGAACATTCGGTACTCAAAACCCTCCACTATGATGAAATGCTGGTCTACTCTTATTGGACGTTTCATCATGTTAGCACCAATTAGAACTGTGAGCACTGAAAGTAGGAGATGTCCTCTGTTAACTGTTCAGCCATGTCGAGGAATGGTGGACGAGAAGTTTCAGGTCGTCATAAAGAATTTACTGCCAAATCAAGAGGTAACGCTACACTCTCTACATCAGTCTGAAGATAAGGACTGCTGGGAGGCTTTTGGACACTATATCAGTGATGAACATGGAACAGTAACAGTGGCAAAAGATGAAAGTTTGGGAGGCACATATGAAGGGACAGAGCAGATGGGTTTGTTGTGGAGCCTGAGGCCTGTACCAGGAAGTCGACCTGCAATCAGGTTGCGCAAAACGAATTTACTCACACCAATGGTAGTTAATATATCAGTCTACAGTGGGCATACTTCTCAAGGATTCAGTCAGACTTCAGCGCTGGCCACTACTGTCACAGAGCGCTGGTACATGGCACCAGGTGTACAGAGGGTGGACATAAGAGAGAACGGAGTTCAAGGAACTTTATTTCTTCCCCCAGGCCCTGGGCCATATCCAGGAGTGCTGGATCTATGGGGAGGAAGTGCTGGATTGATTGAATATCGTTCTGCTCTGCTTGCATCTCATGGCTTTGCATGTATGGCCCTAGAATACACAACTCCAGCAAAGCTAAAAAAGACAGATGTTAATAATACATACTTTGAGAAAGCATACAAGATTTTGCAAAATCATCCGTTAGTACAGAAGGACAAGATGGCGATGCTTGGGTTGTGTTTTGGAAGTGCTATTACATTCAGTATGACTGCCTACTCTTCAGTCATCAAGCCCCAGTGCTGTGTGTGTATCAGTGGAAGTCATGTGGTTCCTGTTGATAAATGCATCTTTGAAGTCTTGGAGGACATGAAAAGGCGAATGGGTAAAGTGCCAGTAAATGAGGACAACCACTTGATACACAGAGACACGATCTTGCCGATTCCCTCAGACCCGGATCTGAAAGTAGACGCTGGGAGAATAAAGTGTCCTATTATGTTGGTGAATGGTACTGATGATCAGAATTGGGCTACTGTTGAATCTGCACAAGATATTGAGATGATAATGGAGAAAGCAGGAAATCGGCACCTGCTGACTGTCTTCACATACCCTGACGCTGGTCATTTGATTGAACCTCCATACACACCTCACTTCAGAGCAACTAACGTCCTCCTGCATAAAAAGGAGAAAGTTGTCATGCTGTGGGGTGGACAAACTAAACCACATGCATACGCTCAAGAAGACTCATGGGAGAAGATTTTAGCCTTTTTCCAAGAGCACCTCTACAGTTCAAACTTTAAGGCCAAACTGTAATTCCTTTATTTTAGACTGTGATATATGACCAACTTCATTTCAAATGCAGTTAAATGCAATGATGATGCAGCCAGTACTTGATGCTAGATTTCACTTTGTTATCTGTATTGAATAAAAGAAAGTGCATCCTTTTTTAGTAGAAACATGccataatgcattattattattgtaataatttttgttataattatacaaaataattttgaCTCTACAATTTTTTCTTTGGTAACCACCTCTGcttaataaaagcataaataataa
>TCONS_00053817
ATGAAATGCTGGTCTACTCTTATTGGACGTTTCATCATGTTAGCACCAATTAGAACTGTGAGCACTGAAAGTAGGAGATGTCCTCTGTTAACTGTTCAGCCATGTCGAGGAATGGTGGACGAGAAGTTTCAGGTCGTCATAAAGAATTTACTGCCAAATCAAGAGGTAACGCTACACTCTCTACATCAGTCTGAAGATAAGGACTGCTGGGAGGCTTTTGGACACTATATCAGTGATGAACATGGAACAGTAACAGTGGCAAAAGATGAAAGTTTGGGAGGCACATATGAAGGGACAGAGCAGATGGGTTTGTTGTGGAGCCTGAGGCCTGTACCAGGAAGTCGACCTGCAATCAGGTTGCGCAAAACGAATTTACTCACACCAATGGTAGTTAATATATCAGTCTACAGTGGGCATACTTCTCAAGGATTCAGTCAGACTTCAGCGCTGGCCACTACTGTCACAGAGCGCTGGTACATGGCACCAGGTGTACAGAGGGTGGACATAAGAGAGAACGGAGTTCAAGGAACTTTATTTCTTCCCCCAGGCCCTGGGCCATATCCAGGAGTGCTGGATCTATGGGGAGGAAGTGCTGGATTGATTGAATATCGTTCTGCTCTGCTTGCATCTCATGGCTTTGCATGTATGGCCCTAGAATACACAACTCCAGCAAAGCTAAAAAAGACAGATGTTAATAATACATACTTTGAGAAAGCATACAAGATTTTGCAAAATCATCCGTTAGTACAGAAGGACAAGATGGCGATGCTTGGGTTGTGTTTTGGAAGTGCTATTACATTCAGTATGACTGCCTACTCTTCAGTCATCAAGCCCCAGTGCTGTGTGTGTATCAGTGGAAGTCATGTGGTTCCTGTTGATAAATGCATCTTTGAAGTCTTGGAGGACATGAAAAGGCGAATGGGTAAAGTGCCAGTAAATGAGGACAACCACTTGATACACAGAGACACGATCTTGCCGATTCCCTCAGACCCGGATCTGAAAGTAGACGCTGGGAGAATAAAGTGTCCTATTATGTTGGTGAATGGTACTGATGATCAGAATTGGGCTACTGTTGAATCTGCACAAGATATTGAGATGATAATGGAGAAAGCAGGAAATCGGCACCTGCTGACTGTCTTCACATACCCTGACGCTGGTCATTTGATTGAACCTCCATACACACCTCACTTCAGAGCAACTAACGTCCTCCTGCATAAAAAGGAGAAAGTTGTCATGCTGTGGGGTGGACAAACTAAACCACATGCATACGCTCAAGAAGACTCATGGGAGAAGATTTTAGCCTTTTTCCAAGAGCACCTCTACAGTTCAAACTTTAAGGCCAAACTGTAATTCCTTTATTTTAGACTGTGATATATGACCAACTTCATTTCAAATGCAGTTAAATGCAATGATGATGCAGCCAGTACTTGATGCTAGATTTCACTTTGTTATCTGTATTGAATAAAAGAAAGTGCATCCTTTTTTAGTAGAAACATGccataatgcattattattattgtaataatttttgttataattatacaaaataattttgaCTCTACAATTTTTTCTTTGGTAACCACCTCTGcttaataaaagcataaataataatcTGAGATAATTTCATTTTCTAATTTAGTTGGActtgtttgatttaaaaaaagaatgtcTGTTTTCATGTCTGTTGAATGATTACATATGAAGTGACTGTCGTGGTATTTTTGGATGTAATTAACTATTGTATAATTAACCTGTATGAGTTGCAAATGCAAaaagtttgctcatttctttactgataagataatatcagaaaggcaatcagctcatcctaTCAGCCAAGTTTTGTTGATGTCAGACAGGATCAACCACAACTCAAGTCAAGG

Function

symbol description
acot16 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to act upstream of or within lipid metabolic process.

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0006637 acyl-CoA metabolic process biological_process
GO:0047617 acyl-CoA hydrolase activity molecular_function
GO:0016790 thiolester hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041210-201 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to act upstream of or within lipid metabolic process.

Ensembl:

ensembl_id ENSDARG00000069292

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053815 False 813 mRNA 0.45 6 25651720 25657853
TCONS_00053816 False 1674 mRNA 0.42 12 25651724 25666563
TCONS_00053817 True 1883 mRNA 0.40 11 25654686 25666835

Neighbor

gene id symbol gene type direction distance location
XLOC_027352 acot15 coding upstream 3734 25627147 ~ 25647986 (+)
XLOC_027351 acot14 coding upstream 30986 25607101 ~ 25620734 (+)
XLOC_027350 il15ra coding upstream 75007 25558849 ~ 25576713 (+)
XLOC_027349 prkcq coding upstream 210593 25410293 ~ 25441127 (+)
XLOC_027348 sfmbt2 coding upstream 292686 25300910 ~ 25359034 (+)
XLOC_027354 acot17 coding downstream 11278 25678113 ~ 25691507 (+)
XLOC_027355 acot18 coding downstream 24807 25691642 ~ 25704064 (+)
XLOC_027356 lamb1b coding downstream 37744 25704579 ~ 25751361 (+)
XLOC_027357 NA coding downstream 87202 25754037 ~ 25755349 (+)
XLOC_027358 vezt coding downstream 245473 25912308 ~ 25946970 (+)
XLOC_027345 NA non-coding upstream 561873 25084095 ~ 25089847 (+)
XLOC_027344 NA non-coding upstream 635452 25014049 ~ 25016268 (+)
XLOC_027343 NA non-coding upstream 892939 24758348 ~ 24758781 (+)
XLOC_027342 NA non-coding upstream 1762926 23880394 ~ 23888794 (+)
XLOC_027341 NA non-coding upstream 1800072 23844584 ~ 23851648 (+)
XLOC_027365 BX088697.1 non-coding downstream 903863 26570698 ~ 26570813 (+)
XLOC_027366 NA non-coding downstream 1164420 26831255 ~ 26836675 (+)
XLOC_027372 CT583696.1 non-coding downstream 2448772 28115607 ~ 28115721 (+)
XLOC_027375 CU694442.1 non-coding downstream 2717602 28384437 ~ 28407131 (+)

Expression


Co-expression Network