XLOC_027459 (AL953856.4)


Basic Information

Item Value
gene id XLOC_027459
gene name AL953856.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 30903981 ~ 30904129 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053952
AGACAATCGCGGCTTCTCGTTGGACGAGAGTCTACAGTCTACAGTTACCATTGCACGTTCCCTGGGCAGATGTCTGCGaactccccaaatgtgggaatctcgactgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110594

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053952 True 149 snRNA 0.54 1 30903981 30904129

Neighbor

gene id symbol gene type direction distance location
XLOC_027458 si:dkey-178j11.5 coding upstream 94744 30785713 ~ 30809237 (+)
XLOC_027457 zgc:172014 coding upstream 123305 30775376 ~ 30780676 (+)
XLOC_027456 CU207245.1 coding upstream 179650 30718997 ~ 30724331 (+)
XLOC_027455 CU302413.1 coding upstream 257190 30645966 ~ 30646791 (+)
XLOC_027454 NA coding upstream 356975 30546035 ~ 30547006 (+)
XLOC_027460 AL953856.1 coding downstream 1143 30905272 ~ 30905435 (+)
XLOC_027461 AL953856.5 coding downstream 2449 30906578 ~ 30906741 (+)
XLOC_027462 si:dkey-47k16.4 coding downstream 180885 31085014 ~ 31095639 (+)
XLOC_027463 BX571711.20 coding downstream 327441 31231570 ~ 31231725 (+)
XLOC_027464 BX571711.1 coding downstream 328987 31233116 ~ 31233279 (+)
XLOC_027452 CR383668.1 non-coding upstream 500218 30402837 ~ 30403763 (+)
XLOC_027449 CR936249.1 non-coding upstream 643145 30256991 ~ 30260836 (+)
XLOC_027448 NA non-coding upstream 713192 30186050 ~ 30190789 (+)
XLOC_027465 BX571711.3 non-coding downstream 335176 31239305 ~ 31239453 (+)

Expression


Co-expression Network