XLOC_027461 (AL953856.5)


Basic Information

Item Value
gene id XLOC_027461
gene name AL953856.5
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 30906578 ~ 30906741 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053954
atacctacctggcaggggagataccatgatcaagaaggtggttcacccaggtcGAGgtttggccattgcactccggccacgctgacccctacgaattccccaaatgtgggagtcttgactgcataatttctggtagtgggggactgggttcgcgctctcccctg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110759

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053954 True 164 snRNA 0.56 1 30906578 30906741

Neighbor

gene id symbol gene type direction distance location
XLOC_027460 AL953856.1 coding upstream 1143 30905272 ~ 30905435 (+)
XLOC_027459 AL953856.4 coding upstream 2449 30903981 ~ 30904129 (+)
XLOC_027458 si:dkey-178j11.5 coding upstream 97341 30785713 ~ 30809237 (+)
XLOC_027457 zgc:172014 coding upstream 125902 30775376 ~ 30780676 (+)
XLOC_027456 CU207245.1 coding upstream 182247 30718997 ~ 30724331 (+)
XLOC_027462 si:dkey-47k16.4 coding downstream 178273 31085014 ~ 31095639 (+)
XLOC_027463 BX571711.20 coding downstream 324829 31231570 ~ 31231725 (+)
XLOC_027464 BX571711.1 coding downstream 326375 31233116 ~ 31233279 (+)
XLOC_027465 BX571711.3 coding downstream 332564 31239305 ~ 31239453 (+)
XLOC_027466 NA coding downstream 337893 31244634 ~ 31245599 (+)
XLOC_027455 CU302413.1 non-coding upstream 259787 30645966 ~ 30646791 (+)
XLOC_027454 NA non-coding upstream 359572 30546035 ~ 30547006 (+)
XLOC_027452 CR383668.1 non-coding upstream 502815 30402837 ~ 30403763 (+)
XLOC_027467 NA non-coding downstream 339000 31245741 ~ 31246667 (+)

Expression


Co-expression Network