XLOC_002802


Basic Information

Item Value
gene id XLOC_002802
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26441052 ~ 26447171 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006055
CCTTAACAAAGGTAACTTGTGCTTCGGGGATGGCACCATTAATACTGAATAGTACAGATATTTTGGATCAGATTCTTTCCAGGGAACAAAATGATACTCTCGCTGAGACCTCATACATCCTTCCTGAAGTTCAGAGGCCAGGCATTACTGTCGGAAATGGATGAGCTGAATGATCTGGCCTCCTGTGCAGACGGAAGCTCTCGCAGGACTGTTTCCACCTTTCTTGGGGTCGAAGGACAAACATCTTTATCACCGAGGCACAACAATCTTCATAACAATAAACAGGAAGCAGacatGACTTCAACTTACCATAATTGACTCCCATTCTCTTTTTAGTCCAAACTGTGCCCACTAAACTAGACTGTAAAAGCTGCTGACATAATGAAAAAAGACATTTATTCCTCATTTCCTGTCCTGACATTGCAGAGGGTGACCTCATCCTTACGAAAGTGTGAACTGGAGTTGTACCAGACATTTGTAAATGGATGTAATGTTGACCAAAGAAAG
>TCONS_00006056
GTCAGCAACAGCAAGTATAAAAACCAGGTTCTGTTTTAGGACAGGGTTGTGTCAGTACCCTTAACAAAGATACTCTCGCTGAGACCTCATACATCCTTCCTGAAGTTCAGAGGCCAGGCATTACTGTCGGAAATGGATGAGCTGAATGATCTGGCCTCCTGTGCAGACGGAAGCTCTCGCAGGACTGTTTCCACCTTTCTTGGGGTCGAAGGACAAACATCTTTATCACCGAGGCACAACAATCTTCATAACAATAAACAGGAAGCAGacatGACTTCAACTTACCATAATTGACTCCCATTCTCTTTTTAGTCCAAACTGTGCCCACTAAACTAGACTGTAAAAGCTGCTGACATAATGAAAAAAGACATTTATTCCTCATTTCCTGTCCTGACATTGCAGAGGGTGACCTCATCCTTACGAAAGTGTGAACTGGAGTTGTACCAGACATTTGTAAATGGATGTAATGTTGACCAAAGAAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006055 False 507 lncRNA 0.42 3 26441052 26447113
TCONS_00006056 True 483 lncRNA 0.43 3 26441052 26447171

Neighbor

gene id symbol gene type direction distance location
XLOC_002801 dchs1b coding downstream 10884 26268790 ~ 26430168 (-)
XLOC_002800 fhdc3 coding downstream 214824 26190807 ~ 26226228 (-)
XLOC_002799 trim3b coding downstream 261247 26129830 ~ 26179805 (-)
XLOC_002798 trpc4a coding downstream 580950 25829262 ~ 25860102 (-)
XLOC_002797 ftr54 coding downstream 617794 25819996 ~ 25823258 (-)
XLOC_002803 SLC46A3 coding upstream 55163 26502334 ~ 26512993 (-)
XLOC_002804 fgf13b coding upstream 269191 26716362 ~ 26744166 (-)
XLOC_002805 mcf2b coding upstream 315622 26762793 ~ 26766780 (-)
XLOC_002806 mcf2b coding upstream 323876 26771047 ~ 26793448 (-)
XLOC_002807 NA coding upstream 389665 26836836 ~ 26872413 (-)
XLOC_002793 NA non-coding downstream 749382 25690872 ~ 25691670 (-)
XLOC_002792 NA non-coding downstream 753834 25686901 ~ 25687218 (-)
XLOC_002790 NA non-coding downstream 941578 25494173 ~ 25499474 (-)
XLOC_002788 NA non-coding downstream 1050379 25380998 ~ 25390673 (-)
XLOC_002779 NA non-coding downstream 1588527 24833696 ~ 24852525 (-)
XLOC_002808 CR545465.2 non-coding upstream 445396 26892567 ~ 26895076 (-)
XLOC_002809 NA non-coding upstream 454101 26901272 ~ 26902305 (-)
XLOC_002813 NA non-coding upstream 553391 27000562 ~ 27002614 (-)
XLOC_002816 NA non-coding upstream 710766 27157937 ~ 27162145 (-)

Expression


Co-expression Network