XLOC_002808 (CR545465.2)


Basic Information

Item Value
gene id XLOC_002808
gene name CR545465.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 26892567 ~ 26895076 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005206
GTGACTGGCAGTGGGAAGGAGAGGGAGGAAGGTGAAGGTGGCTTGGGAAATTGACCAGAAGAATAACGGGTTTCGCACAAGGCTTCAAGTCTGGAGGATGTCTCAATACCTGGCACAGTGCCAGCAGATGGATGCTTAAGCGTGTCGGAGAGCGAGAGCGAGGAGGTTTTGGGCTCGAGGAAGGGGACTGGCGTGGGGGAAACAGGGCGAGCACCGGGCACAATCTTGGGCTTAAAAACATTGGCACGAGGTGCTCCAAAAGAATCTGAGGCAAAAGTTCAGTGACACAAAAAAGGACGCAGACCACGTAAAAGAAGAGGATTAGTCAGAGAGGCAAGAAAAGTGAGAACTTAAGAGAAACTAAGAGGAAACGATTCTTCCCCAAAGCCATCTTCAGGTTTCATTCAGCGTCAAATCAGAAACAGATGTACAGTAAACAGTAAAAACTCTGTACCTTTCACAAGTACATCAGGAGGAGAGGGAGGCTGAGGGAGGAAAGGATCCGATGGAGAAGACAGAGAAGCCCGAGGGAGTTTGAGCAGAGGATAATCAGAGGTCACTGGGCCCTCTGGAGGCCCCTCAGAGCCCGACAGCCTTCTTGGGAAAGACACTGGAGCTGGACACAATTACAGAGGGGAAAGCAGATGGAGAAACAATAGGCTTGGTTTAGAAATACACAGATGCATAAGTGCTGTTTTTACTAttatataatgttgtttttttactggcattgatggattcatgaaaacaTCCATAGAACCATTTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097136

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005206 True 766 lncRNA 0.48 2 26892567 26895076

Neighbor

gene id symbol gene type direction distance location
XLOC_002807 NA coding downstream 20154 26836836 ~ 26872413 (-)
XLOC_002806 mcf2b coding downstream 99119 26771047 ~ 26793448 (-)
XLOC_002805 mcf2b coding downstream 125787 26762793 ~ 26766780 (-)
XLOC_002804 fgf13b coding downstream 148401 26716362 ~ 26744166 (-)
XLOC_002803 SLC46A3 coding downstream 379574 26502334 ~ 26512993 (-)
XLOC_002809 NA coding upstream 6196 26901272 ~ 26902305 (-)
XLOC_002810 znhit2 coding upstream 87178 26982254 ~ 26985231 (-)
XLOC_002811 MRPL49 coding upstream 92032 26987108 ~ 26989875 (-)
XLOC_002812 zgc:193742 coding upstream 96729 26991805 ~ 26999496 (-)
XLOC_002813 NA coding upstream 105486 27000562 ~ 27002614 (-)
XLOC_002802 NA non-coding downstream 445396 26441052 ~ 26447171 (-)
XLOC_002793 NA non-coding downstream 1200897 25690872 ~ 25691670 (-)
XLOC_002792 NA non-coding downstream 1205349 25686901 ~ 25687218 (-)
XLOC_002790 NA non-coding downstream 1393093 25494173 ~ 25499474 (-)
XLOC_002816 NA non-coding upstream 262861 27157937 ~ 27162145 (-)
XLOC_002817 BX248510.3 non-coding upstream 274880 27169956 ~ 27170072 (-)
XLOC_002819 AL844197.1 non-coding upstream 519170 27414246 ~ 27414362 (-)

Expression


Co-expression Network