XLOC_002831 (CR392341.1)


Basic Information

Item Value
gene id XLOC_002831
gene name CR392341.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 28442740 ~ 28443740 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005250
GCAGAAGAGTCACAAACGCTGAGCACATCAACATGGTTTTGAAACGGATTACAGACTATCTTTTTTTTTGGACTTTAATTCATCTTCCAAATACAGATGCGGAGAAAGTTATCAAAGCAGTGGAAGGAGCGACTGTCCATCTGCCCTGCCATTTACCTCCTGTAGAGAGTCAACTAGTTACAGTAGAGTGGAGCATCAATACAACCAGTAGCAATTTTATTTGTACATGGAACATTAATATGTCCAACTCCCTTGTATCTCCCTTAAAATACTGCTTTCCTCATTTTACATTAACCAGTAAGCCTATTAGATTAGAGATCAAAAATGTTCAGCCTGGTCACTCTGGTAAATACAGCTGTAAAACAACAATAGTAATTCCACCTCCGTCAGTGGACGAAAGCTCATCTCTGAATCTCCAAGTCGCAGGTCTGTCCCTGAAGCCACTGAACAGCACTAATGACAGCTGTGTTCATCTGCTCTGCTCTCTTGACTCTGAGCTGGCCAACTTCAACTGGAGTCGAGGAGGTCAGATGTTACCACATGTGTCCACATTTAATGACAATAGTAGTGAACTGCAGCTGTGCAAACCTGACTGGAGTGAAGGAGACACAATCACCTGTCACGTCAACTATTTAGGAATCCAAACCCAAAAAAGCATCAAATTCAACAGTTCAAAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093623

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005250 True 678 processed_transcript 0.42 3 28442740 28443740

Neighbor

gene id symbol gene type direction distance location
XLOC_002830 NA coding downstream 24561 28417651 ~ 28418179 (-)
XLOC_002829 CR392341.4 coding downstream 47120 28392426 ~ 28395620 (-)
XLOC_002828 NA coding downstream 57171 28382085 ~ 28385569 (-)
XLOC_002827 btg3 coding downstream 61812 28370816 ~ 28380928 (-)
XLOC_002826 cltca coding downstream 73827 28311031 ~ 28368913 (-)
XLOC_002832 CR392341.2 coding upstream 4166 28447906 ~ 28448868 (-)
XLOC_002833 CR392341.3 coding upstream 10760 28454500 ~ 28455171 (-)
XLOC_002834 NA coding upstream 16473 28460213 ~ 28465026 (-)
XLOC_002835 bbx coding upstream 26567 28470307 ~ 28525611 (-)
XLOC_002836 alcama coding upstream 288009 28731749 ~ 28835812 (-)
XLOC_002825 CR392341.5 non-coding downstream 149781 28292843 ~ 28292959 (-)
XLOC_002823 NA non-coding downstream 150751 28197916 ~ 28291989 (-)
XLOC_002824 NA non-coding downstream 193997 28246835 ~ 28248743 (-)
XLOC_002837 BX537347.2 non-coding upstream 478395 28922135 ~ 28922251 (-)
XLOC_002838 BX537347.1 non-coding upstream 479777 28923517 ~ 28923633 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location