XLOC_028481 (faxca)


Basic Information

Item Value
gene id XLOC_028481
gene name faxca
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 5750854 ~ 5764255 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055275
TCGCGCGCTCAGCTGTGCGGTAAACAGCGGCGGCGAGCGGCTGCGGACTGATGCCGAAAACAGCGCGGGCTCGACGGTCATCAGGAGGAGACATGCCCGCCGCAGCCACCCACAGACCCGCGGACACACTGCGCAATAGCCTGCGGCACTGATGAAGCCTCCTCTACCGGAGCCACAGCGGGCCGAAGGGCGGATAGAGGAGAGAGAGGATGTACTGGCGCGTGGGCTTCGGCTGGAGCCGCTCGTGCGCGCTTGAGCTCGGCCGAAACAGGAGCTTCTCCTTCGGCCTCTGCAGGTCCGACGAGCAAATGTCTTTGCATGGGTTCATCATCGCCTACCCGCTGCAGGAGTACGGGGGGATCATGTCCGCGCTAGGGGTCGACTCCTGGTGGAGGAAAACGCTCTACATTACCGGGGGCGCGCTGCTCGCCGCCGCTGCCTATTTACTACACGAGCTTCTTGTCATAAGGAAGGAACAGGAGTTGGATTCTGAAGACACCATCATTCTGCATCAGTTTGCCCGGCCCAAAACTGGGGTCCCAAGCCTGTCGCCCTTCTGCCTGAAGATCGAGACATACCTGCGCATGGCTGACCTGCCCTACCAGAACTACTTTGATGGCCAGCTGTCTCCTCAAGGGAAGATGCCTTGGATTGCATATAATAAAGAGCAGGTTTGTGGGACGGAGTTTATCATCGACTTCCTGGAGGAGCAGCTCGGGGTGAACCTGAACTCCAGCCTGAGTCCTCAAGAGAAAGCCATCTCACGCGCCATCACCAAAATGGTGGAGGAACACTTTTACTGGACAATAGCGTACTGTCAGTGGGTGGACAATGTAGAGGAGACCCAGAAGATGTTGTCTACGAACGGGCCGCTGAGTGACCTGCTCCGGCAGATCCTCGGTCAGGTGACCGGTGGGATCGTGAAGAGGGAGATGTACGGCCACGGCATCGGACGTTTCTCCAGAGATGAGGTTTACAAGCTGATGGAGAAAGACATGCGCACACTGGCCACCCTTCTTGGCAATAAAAAGTACCTTATGGGTCAGACATTTTCCACAGTGGATGCTGCTGTATTCGGTCATCTTGCCCAGGCCATGTGGACTCTTCCAGGAACACGTCCAGAGCAGTTAATTAAAGGTGAGTTCATAAATCTAGCCATGTACTGCGAGCGAATCCGTCGCAAATTCTGGCCTGAGTGGTTCGTGGATGTAGATGACCTTTACTACGATGGGCTGAGCGAAGAGCCGGATTCCCCCTCCCAGCTCCAGGATTTGGGTCTGCACTCATGCAGTTTCCAGGAGCAGGAGAGCAGCGTTTCTCATCAGGACACCCCTTCACCGGACAGTGACATCACCGGACGCTCTCTGTGTGACTCTGATATGGACACCGAATGCTCAGTCTCAGAGGCGGAGCTACTGAAGTGATGGCCACACCTCATTTGATGATGTGTCTGCACGGGCCCCGCCCCCCATTTATTGTCCCAAACCCTTTATCAGGGAAAGGGCTGGTCAGGAACAGTAGCGTTTTTTTTCCTGCAAGGAATTCTGATGATAATATTGAGGATTTTTACTGATTGAAGGAAAAGCCAGACCAGAGGGAAGTCAGGAAGATGTGTTGAATATTGGAGTGAATGACGCGTCGGCTGAATCACTCCTCCTGTGGATGTGACATCATCACAGCCCTAGAAATGACATCATCACCTGTGACCACTTCCCAATCACTGCGTGTGTTTGTAGCTAGACTGCATTTTTCTTGCATTCTCCCGGGATTTGGTAATGTATGGGTTGCCTAAAATGACTAAAGTGTGTAGATACTGTATGAAGTGAAGCGGCACAATATTTTCTGTGGTCAAATTGCAGTTCATGTCCTGTTTTATTCGGTCAAACCCATAACTAGTGATCAGCTGATACTATTATTTTCCTAAACTGTCGCAGATATCCCACTGCTTGATTAATGGTTATATTATGCAATGCATTGATGGATAATTCACCCCCAAAATGAAAGGATTTTAAATAGTTTCTTGTCTGCATGACTTGCTTTTGGCACATTATGCAAtgcattaataattaattcatccaaaaattgaaatatattttttaattattagcctGCATGACTTTCTTCAAACGAATATAAGATATTTTGAGCAAAGTTGTAtgcatatgc

Function

symbol description
faxca Orthologous to human FAXC (failed axon connections homolog, metaxin like GST domain containing).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100422-7 Orthologous to human FAXC (failed axon connections homolog, metaxin like GST domain containing).

Ensembl:

ensembl_id ENSDARG00000075956

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055275 True 2166 mRNA 0.51 6 5750854 5764255

Neighbor

gene id symbol gene type direction distance location
XLOC_028478 NA coding downstream 4969 5693170 ~ 5745885 (-)
XLOC_028480 NA coding downstream 10916 5739010 ~ 5739938 (-)
XLOC_028479 NA coding downstream 13509 5735370 ~ 5737345 (-)
XLOC_028477 tmem63a coding downstream 59597 5665182 ~ 5691257 (-)
XLOC_028476 rsph9 coding downstream 98824 5645251 ~ 5652030 (-)
XLOC_028482 ccnc coding upstream 231 5764486 ~ 5775507 (-)
XLOC_028483 pgm3 coding upstream 20715 5784970 ~ 5795309 (-)
XLOC_028484 foxm1 coding upstream 43709 5807964 ~ 5831522 (-)
XLOC_028485 slc5a8 coding upstream 85970 5850225 ~ 5863906 (-)
XLOC_028486 arl1 coding upstream 142703 5906958 ~ 5913338 (-)
XLOC_028474 NA non-coding downstream 197672 5545002 ~ 5553182 (-)
XLOC_028471 NA non-coding downstream 291385 5421746 ~ 5459469 (-)
XLOC_028487 NA non-coding upstream 349186 6113441 ~ 6116670 (-)
XLOC_028488 NA non-coding upstream 413331 6177586 ~ 6252483 (-)
XLOC_028491 NA non-coding upstream 812522 6576777 ~ 6580547 (-)
XLOC_028493 NA non-coding upstream 1256195 7020450 ~ 7024297 (-)
XLOC_028494 FO681358.2 non-coding upstream 1420940 7185195 ~ 7185311 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000020_07050004_07055580 FAXCA coding CI01000020 null 7049394 ~ 7055828 (+)