G1016683


Basic Information

Item Value
gene id G1016683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 74431908 ~ 74432198 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1156325
ATTATGGACTAGacattcaaatcctgttgctgcaggattattttgctgtgacaatatgagtcaaattaagatcctacatctgtacatatgGTGAAACATACAGACTATATGGTTAGAACCGTTCATTACCTTACTGAGGGTCTCTAGCTTCTTCCTCTGCTTGTCGTTAGTGGCCAGGGAGGCAAACTGCTGTAGCAGGACTGGGCTGGGGGGCGTGGTGATATCCAGGAAGTACTGGAAGGCCTGGTAGATGGTGCAAGGGGGGAACCGAGGTTCCTCCAGCCAGTTACT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1156325 True 291 lncRNA 0.47 1 74431908 74432198

Neighbor

gene id symbol gene type direction distance location
spring1 cssa20h12orf49 coding upstream 115327 74312531 ~ 74316581 (+)
LOC110536377 tesc coding upstream 169202 74251421 ~ 74262706 (+)
LOC110536376 fbxo21 coding upstream 180724 74237724 ~ 74251184 (+)
zgc:112294 LOC106579817 coding upstream 420665 74007753 ~ 74011243 (+)
selenoe fep15 coding upstream 426305 74001387 ~ 74005603 (+)
LOC118937457 NA coding downstream 87187 74519385 ~ 74521046 (+)
rfc5 rfc5 coding downstream 257257 74689455 ~ 74697615 (+)
pebp1 pebp1 coding downstream 275102 74707300 ~ 74711617 (+)
LOC118937390 NA coding downstream 290676 74722874 ~ 74731148 (+)
LOC110536385 suds3 coding downstream 445258 74877456 ~ 74888265 (+)
G1016679 nos1 non-coding upstream 5506 74425926 ~ 74426402 (+)
G1016678 NA non-coding upstream 7420 74424131 ~ 74424488 (+)
G1016676 NA non-coding upstream 20043 74411403 ~ 74411865 (+)
G1016623 NA non-coding upstream 21562 74408093 ~ 74410346 (+)
G1016670 NA non-coding upstream 37971 74393470 ~ 74393937 (+)
G1016684 nos1 non-coding downstream 529 74432727 ~ 74433109 (+)
G1016685 NA non-coding downstream 1053 74433251 ~ 74433474 (+)
G1016686 NA non-coding downstream 2566 74434764 ~ 74435088 (+)
G1016687 NA non-coding downstream 3565 74435763 ~ 74436219 (+)
G1016689 NA non-coding downstream 6650 74438848 ~ 74439119 (+)
LOC110535110 LOC106579812 other upstream 1263466 73155366 ~ 73254792 (+)
G1014834 NA other upstream 1670963 72760521 ~ 72760945 (+)
G1013922 NA other upstream 2552236 71879296 ~ 71879672 (+)
G1013617 NA other upstream 2591438 71838302 ~ 71840882 (+)
LOC110536353 LOC106580623 other upstream 2634593 71738585 ~ 71797315 (+)
G1017593 NA other downstream 868140 75269723 ~ 75328737 (+)
LOC110536406 LOC106570821 other downstream 2056310 76396096 ~ 76600566 (+)
G1018678 NA other downstream 2091940 76524138 ~ 76525567 (+)
G1019189 ptar1 other downstream 2386307 76818505 ~ 76821968 (+)
mamdc2a LOC106570826 other downstream 2457529 76889699 ~ 76939449 (+)

Expression


Co-expression Network