G1018603


Basic Information

Item Value
gene id G1018603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 76281568 ~ 76281825 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1158477
acaaaaggcTGCACACGGTCTATTATCTCCAGGAGCAGAGGTTATCTAGATTACAGCTGGTGTATCTGTTGACAGGACGAACTTGCATGAccccgagcgagagagagcgaggaagagagagagaggtagagagagagagggagagaaagaggtagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgataaaatCATAGCCTATTTGAAATAATGGCTGACATATTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1158477 True 238 lncRNA 0.47 2 76281568 76281825

Neighbor

gene id symbol gene type direction distance location
LOC110536397 LOC106570810 coding upstream 127848 76150401 ~ 76153720 (+)
LOC110535118 LOC106570809 coding upstream 150444 76110124 ~ 76131124 (+)
LOC110536393 NA coding upstream 403236 75866632 ~ 75878332 (+)
LOC118937399 NA coding upstream 898275 75374099 ~ 75383293 (+)
fxn LOC100194686 coding downstream 89220 76371045 ~ 76384578 (+)
LOC110536406 LOC106570821 coding downstream 114271 76396096 ~ 76600566 (+)
LOC118937404 LOC106570822 coding downstream 335585 76617410 ~ 76662227 (+)
LOC110536409 LOC106570807 coding downstream 567149 76848974 ~ 76856364 (+)
mamdc2a LOC106570826 coding downstream 607874 76889699 ~ 76939449 (+)
G1018539 NA non-coding upstream 8412 76168934 ~ 76273156 (+)
G1018596 NA non-coding upstream 13655 76266391 ~ 76267913 (+)
G1018595 NA non-coding upstream 15620 76265574 ~ 76265948 (+)
G1018538 NA non-coding upstream 113661 76167688 ~ 76167907 (+)
G1018534 NA non-coding upstream 119584 76161763 ~ 76161984 (+)
G1018651 NA non-coding downstream 74562 76356387 ~ 76356908 (+)
G1018662 NA non-coding downstream 96896 76378721 ~ 76379088 (+)
G1018726 NA non-coding downstream 239757 76521582 ~ 76522118 (+)
G1018730 NA non-coding downstream 246845 76528670 ~ 76529940 (+)
G1018731 NA non-coding downstream 247759 76529584 ~ 76532639 (+)
G1017593 NA other upstream 952831 75269723 ~ 75328737 (+)
LOC110535110 LOC106579812 other upstream 3113126 73155366 ~ 73254792 (+)
G1014834 NA other upstream 3520623 72760521 ~ 72760945 (+)
G1013922 NA other upstream 4401896 71879296 ~ 71879672 (+)
G1013617 NA other upstream 4441098 71838302 ~ 71840882 (+)
G1018678 NA other downstream 242313 76524138 ~ 76525567 (+)
G1019189 ptar1 other downstream 536680 76818505 ~ 76821968 (+)
LOC110536414 NA other downstream 852066 77131426 ~ 77139724 (+)

Expression


Co-expression Network