G1018740


Basic Information

Item Value
gene id G1018740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 76556948 ~ 76558393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1158675
ctggtatcgagtatcgttctggtatcgagtatcgtttcggtatcgagtatcattctggtatcgagtatcgttctggtatcgagtatcgttctggtatcgagtatcgttctggtatcgagtatcattctggtatcgagtatcgttctggtatcgagtatcgttctgGTATCGAGTATCATGCTACTTAACCTGGTATCGGTATTGAAGTCAAAtttctggtatcgtgacaacactacactacactacactatacagtaCAGATTAGTGTTCCCAAGTCTCATTGGGTTGCCAAGTCTCATTGGGTTGCCAAGTCTCATTGGGTTGCCAAGTCTCATTGGGTTGCCAAGTCTCATTGGGTTGCCAAGTCTCATTGGCAACACTATACAGTCATCATGAGCATGAAAACCAACCATTCTTTGACTCAACACTGGGTGTTTCATAAGCATGAATAGGGTCAAATAGGAAACATATTACAGCTGATCCAGATCAGTTTAGGAGTGTGAAGATACTCTATATTAGTCATCAGTAGAAAACTAATTTCAAAAGTATCCAATGACATTATTTAAATATTCCTTGAGAGTAGACAGCTACCAATCAGGCCACGGCCCtgttgaggtaaaaaaaaaaatctggctTTTAAGGGGTTAAAAATAAAAAGGGACACAAAATGAG

Function

NR:

description
zinc finger CCCH domain-containing protein 13-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1158675 True 672 lncRNA 0.40 3 76556948 76558393

Neighbor

gene id symbol gene type direction distance location
fxn LOC100194686 coding upstream 172370 76371045 ~ 76384578 (+)
LOC110536397 LOC106570810 coding upstream 403228 76150401 ~ 76153720 (+)
LOC110535118 LOC106570809 coding upstream 425824 76110124 ~ 76131124 (+)
LOC110536393 NA coding upstream 678616 75866632 ~ 75878332 (+)
trnaw-cca-7 NA coding upstream 1178117 75378760 ~ 75378831 (+)
LOC118937404 LOC106570822 coding downstream 59017 76617410 ~ 76662227 (+)
LOC110536409 LOC106570807 coding downstream 290581 76848974 ~ 76856364 (+)
mamdc2a LOC106570826 coding downstream 331306 76889699 ~ 76939449 (+)
slc39a14 slc39a14 coding downstream 385327 76943720 ~ 76991807 (+)
LOC110536652 NA coding downstream 451177 77009570 ~ 77010847 (+)
G1018739 NA non-coding upstream 1165 76554731 ~ 76555783 (+)
G1018734 NA non-coding upstream 20447 76534301 ~ 76536501 (+)
G1018731 NA non-coding upstream 24309 76529584 ~ 76532639 (+)
G1018730 NA non-coding upstream 27008 76528670 ~ 76529940 (+)
G1018726 NA non-coding upstream 34830 76521582 ~ 76522118 (+)
G1018775 NA non-coding downstream 76845 76635238 ~ 76641523 (+)
G1018781 NA non-coding downstream 95023 76653416 ~ 76653805 (+)
G1018764 NA non-coding downstream 104245 76662638 ~ 76745469 (+)
G1018762 NA non-coding downstream 110574 76668967 ~ 76754910 (+)
G1018792 apba1 non-coding downstream 120311 76678704 ~ 76679127 (+)
LOC110536406 LOC106570821 other upstream 11527 76396096 ~ 76600566 (+)
G1018678 NA other upstream 31381 76524138 ~ 76525567 (+)
G1017593 NA other upstream 1228211 75269723 ~ 75328737 (+)
LOC110535110 LOC106579812 other upstream 3388506 73155366 ~ 73254792 (+)
G1014834 NA other upstream 3796003 72760521 ~ 72760945 (+)
G1019189 ptar1 other downstream 260112 76818505 ~ 76821968 (+)
LOC110536414 NA other downstream 575498 77131426 ~ 77139724 (+)
LOC110536420 NA other downstream 849636 77407991 ~ 77410527 (+)
G1019753 NA other downstream 909836 77468229 ~ 77469925 (+)

Expression


Co-expression Network