G1019303


Basic Information

Item Value
gene id G1019303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 77044220 ~ 77047675 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1159385
CATCACCCCCACTACATCATCACCTCCACTACATCATCACCCCCAGTACATCAGGAGGCTCAAACTGAAGCAGAGAAGGGAAATGTCCCTTAGTGTAGTCCAAGGGATTTCCAATCAGTTTTCTAAATTTTATTTGACCGAGAGGAACCCACAttcacaaaaaaatgtttttaattaaaTTCACATGAAATAACATCAGGATCACTATAGGTTTTATTTTCCAACAATACATTGAGATGGGTTAGTTGTAGATGCCACAGGCAGTTGTCCCACAccctgacttgtgatcattggaAAATATGTTATGCAAGATATGCAGAACAAAACCACAAAACTGTCGACTTTGGCAACGACCCTGGGACTTAACATGAGCACATCAAACCCCAAGGTAATGAGCATCAACCAAACAACAGACAACACCATAAACCTGGACGGGAGATATACTGGAAGAAGTAACATCTATTCACCGACCTGGGAAGTGTAATCGGGAAAGACGGAGGAAGTGGCGGACTGACGAACAAGAATAGGGAAGTCAAGAACagctttttttaaatgtcaagACAAATATGGACCTCCCAAGATCATTTCAACAAGAAAGCCAATACGCATCTTCAACTCCAATATCCAATCAGTTCTACGGGGAAGAAACGTGGAGAAACACAAACGTAACGAGCAATAGACTTCAAACTTTCAGAAACAAATGCCTAAGACACATCCTGTCAATATACTTGTCAAACACCCATAAGAAACAAAGAACTCGAGGAAGTCACACAACAATAactacatgaaatccaaatgaaATGCAGGTAATGGGGCTGGATTAGAGAAAACTCCGAACGGCATAGGGGACGTTTGTCGAATGACCTATGCTCCCCTAAAAGCAAAAGGTTTTAAGTCAAATAAGAAAAACCTTATGGCCTGGCAGTTCAATCCCAAAAATTAACAAATTGTCATTTCCAACACCAAAATGTGTCGGTATTGACAATTTCCGGGTTATTACCATTACAAAGTAGTGACTTTTTGTATAACTTCTGTATAGAATGTATACCTCCGCTCATTACTGCTTACTACATGATATTATACTGTCTTTATAGCAATCGATTATGTGTAGATATCCATTTCCTCCCACTTATTTTGAACGACTATCCTAATGCGATACACCATTACCCCGTCATTACAGCCACAATGtaatcaataaaatgtatttataaagcactttttacattagcagatgtcccaaagtgctgtacagaagcccggcctaaaaccccaaacagcaagcaatgcaggtgtagaaggaaaaactccctagaaagaggaaccaggctctgaggggtggcaagtcctcttctggctgtgccaggtggacacaTAGCATTTTAAAGAAAACATATATTTACACATGAAATAGCGCACTTCTGTCTATGTCAAGTGTAAAGCACTTGTTCccaatataactattgtaaaaatgATAAATATATAACACTTTCAACAATAAATTGTATTGTCGATGGTAGCCTCCGTGCCGGTATAGAAGCTCAGCCAGCAAAAGGCACATATTTATGGATGAatgaattaaaatatatatttctgatTGTGGTAGCACCAAATCATATAGACAAGATAAAATAAAACCATTGTTTGTCATTcagttttaaaataaaatatgttttatgaTGTGATGCTAATGACATCTGCAGAAGGTTCTGGAAAAACAGTCAAATCTATTGTATTGTTGAAAAAAATAGTCACATCCAATACCAGTTTATGATTCCTGACAAAAGGAGAAAAGTATTCAAGAAACAACTTTTTCAATTTTCATAAGAAATGCCAAAAGTGTCTGTAGTTCCAAAATCACACACATGTCAAATATAGTTTCCAAAATTCTGTGAACCAAAATGTCcatgttttccagaaatcctagtTAGAGGATTCCGGATTTTGTGCTTATTCCTGATTCCGGGAATCTGACAACTAGATTTCTGGACAACGTGGACATTTTGTGAAAGTTATTGGGATTTTGCAACCAGTAGATCCTTCATTCCCagtaaatactgtatgtaaaaacAAGAGACATGTCCTGCTGTATGCTTACCTATGTCAGGTGTGATTGAAAAACGTGCTGCAACAAAACCAATGAACCTTATGGACAGTTGAAACACTTCAAACACTGGTATTggtcatctgtctgtaaactgtACTATATATCGGTTGAATCCGTCTTCTGTCGGCATCTTGACAACGTATTTTGCACTTAGAGTGAAAATCATGGACTGTAAGCTAGCCATTATAGCCTTAATGTTGGTTTGTGCTCACTGTTCAATTGATTATAGTTTATTACCTTGTGTATTTTAGTGATGAGTATGGGGAATAGTACCTCCACTCCAAAACATGTAAATAGTTATATTTATGTCAACATATGTCTTTAATTTCTTTAGTTAAAAGTGGAAACGTCATTTATTTTTAACGGTTTAATGAATGTAAAGTCAGTGCACATCTACAGTACTGAGACAGAAGTTTAAGCTAGCCTGAGTACCAGTTTCTTTCGCTAACATTTGACTCCTTGACACTCCTTGTCATTGCCTTTGgcgtggaatgttagctaaagagactggaacccagactaagTCTAAGGTATCAATCTATTGGGGAACAGTGTACATGACTGAATCAAGTTGAACAAATGTTCCGATCATTGTCACTGCTACTCTAATCAcaccactcatctctctctctctttctctctctctctcgcctgggGATTACTCCATGCCTGAGGGTTTAATTTGATGTCCAGTATTACTGTCTGTACTTGTTAATGTGCTTTTCATGAATGTGTATctgaatatacagtatactaaCTAAAAAGGTACTTGGACGTACAGTACTGGAGTTTACCAAAGCAAAGGTGTGTCTGTATTTCTCTAGTAGTTGTATTTATTGTCAAATAGTTTTCTATGCATTTATTAGGTACAGATACAATTAAAACATTAATATGTAGTTAATTAGTATTTTATTTGTCAGGGACCATGCCAACCAAGTACAAATATACTCCCTTAAATATTTATGAATGAAGCTAAAACTTTTAATTTGGCATTTTGGAATTGATCAAATGTTTCATttgaggcgacagtacagaatgtaaCCTTTTATTGGAGGGTATAttcatacatatatatgtgttttacctttttataaATGAAATATCtgtatgtatctagtctccccatttgaaggtgtcataagtatttggacaaaattCACTTAAGTAAATTAAAGTGGtctggatgctaccatgattacggataatcatgaatgaatcataAATAATGATtattgagaaagttacagaggcacaaagatcataccctaacctctcaccattaccaataggGCAGTATTCA
>TU1159387
CATCACCCCCACTACATCATCACCTCCACTACATCATCACCCCCAGTACATCAGGAGGCTCAAACTGAAGCAGAGAAGGGAAATGTCCCTTAGTGTAGTCCAAGGGATTTCCAATCAGTTTTCTAAATTTTATTTGACCGAGAGGAACCCACAttcacaaaaaaatgtttttaattaaaTTCACATGAAATAACATCAGGATCACTATAGGTTTTATTTTCCAACAATACATTGAGATGGGTTAGTTGTAGATGCCACAGGCAGTTGTCCCACAccctgacttgtgatcattggaAAATATGTTATGCAAGATATGCAGAACAAAACCACAAAACTGTCGACTTTGGCAACGACCCTGGGACTTAACATGAGCACATCAAACCCCAAGGTAATGAGCATCAACCAAACAACAGACAACACCATAAACCTGGACGGGAGATATACTGGAAGAAGTAACATCTATTCACCGACCTGGGAAGTGTAATCGGGAAAGACGGAGGAAGTGGCGGACTGACGAACAAGAATAGGGAAGTCAAGAACagctttttttaaatgtcaagACAAATATGGACCTCCCAAGATCATTTCAACAAGAAAGCCAATACGCATCTTCAACTCCAATATCCAATCAGTTCTACGGGGAAGAAACGTGGAGAAACACAAACGTAACGAGCAATAGACTTCAAACTTTCAGAAACAAATGCCTAAGACACATCCTGTCAATATACTTGTCAAACACCCATAAGAAACAAAGAACTCGAGGAAGTCACACAACAATAactacatgaaatccaaatgaaATGCAGGTAATGGGGCTGGATTAGAGAAAACTCCGAACGGCATAGGGGACGTTTGTCGAATGACCTATGCTCCCCTAAAAGCAAAAGGTTTTAAGTCAAATAAGAAAAACCTTATGGCCTGGCAGTTCAATCCCAAAAATTAACAAATTGTCATTTCCAACACCAAAATGTGTCGGTATTGACAATTTCCGGGTTATTACCATTACAAAGTAGTGACTTTTTGTATAACTTCTGTATAGAATGTATACCTCCGCTCATTACTGCTTACTACATGATATTATACTGTCTTTATAGCAATCGATTATGTGTAGATATCCATTTCCTCCCACTTATTTTGAACGACTATCCTAATGCGATACACCATTACCCCGTCATTACAGCCACAATGtaatcaataaaatgtatttataaagcactttttacattagcagatgtcccaaagtgctgtacagaagcccggcctaaaaccccaaacagcaagcaatgcaggtgtagaaggaaaaactccctagaaagaggaaccaggctctgaggggtggcaagtcctcttctggctgtgccaggtggacacaTAGCATTTTAAAGAAAACATATATTTACACATGAAATAGCGCACTTCTGTCTATGTCAAGTGTAAAGCACTTGTTCccaatataactattgtaaaaatgATAAATATATAACACTTTCAACAATAAATTGTATTGTCGATGGTAGCCTCCGTGCCGGTATAGAAGCTCAGCCAGCAAAAGGCACATATTTATGGATGAatgaattaaaatatatatttctgatTGTGGTAGCACCAAATCATATAGACAAGATAAAATAAAACCATTGTTTGTCATTcagttttaaaataaaatatgttttatgaTGTGATGCTAATGACATCTGCAGAAGGTTCTGGAAAAACAGTCAAATCTATTGTATTGTTGAAAAAAATAGTCACATCCAATACCAGTTTATGATTCCTGACAAAAGGAGAAAAGTATTCAAGAAACAACTTTTTCAATTTTCATAAGAAATGCCAAAAGTGTCTGTAGTTCCAAAATCACACACATGTCAAATATAGTTTCCAAAATTCTGTGAACCAAAATGTCcatgttttccagaaatcctagtTAGAGGATTCCGGATTTTGTGCTTATTCCTGATTCCGGGAATCTGACAACTAGATTTCTGGACAACGTGGACATTTTGTGAAAGTTATTGGGATTTTGCAACCAGTAGATCCTTCATTCCCagtaaatactgtatgtaaaaacAAGAGACATGTCCTGCTGTATGCTTACCTATGTCAGGTGTGATTGAAAAACGTGCTGCAACAAAACCAATGAACCTTATGGACAGTTGAAACACTTCAAACACTGGTATTggtcatctgtctgtaaactgtACTATATATCGGTTGAATCCGTCTTCTGTCGGCATCTTGACAACGTATTTTGCACTTAGAGTGAAAATCATGGACTGTAAGCTAGCCATTATAGCCTTAATGTTGGTTTGTGCTCACTGTTCAATTGATTATAGTTTATTACCTTGTGTATTTTAGTGATGAGTATGGGGAATAGTACCTCCACTCCAAAACATGTAAATAGTTATATTTATGTCAACATATGTCTTTAATTTCTTTAGTTAAAAGTGGAAACGTCATTTATTTTTAACGGTTTAATGAATGTAAAGTCAGTGCACATCTACAGTACTGAGACAGAAGTTTAAGCTAGCCTGAGTACCAGTTTCTTTCGCTAACATTTGACTCCTTGACACTCCTTGTCATTGCCTTTGgcgtggaatgttagctaaagagactggaacccagactaagTCTAAGGTATCAATCTATTGGGGAACAGTGTACATGACTGAATCAAGTTGAACAAATGTTCCGATCATTGTCACTGCTACTCTAATCAcaccactcatctctctctctctttctctctctctctcgcctgggGATTACTCCATGCCTGAGGGTTTAATTTGATGTCCAGTATTACTGTCTGTACTTGTTAATGTGCTTTTCATGAATGTGTATctgaatatacagtatactaaCTAAAAAGGTACTTGGACGTACAGTACTGGAGTTTACCAAAGCAAAGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1159385 False 3404 lncRNA 0.37 2 77044220 77047675
TU1159387 True 2910 lncRNA 0.38 2 77044220 77047181

Neighbor

gene id symbol gene type direction distance location
LOC110536412 LOC106570827 coding upstream 8784 77015447 ~ 77035436 (+)
LOC110536652 NA coding upstream 33373 77009570 ~ 77010847 (+)
slc39a14 slc39a14 coding upstream 52413 76943720 ~ 76991807 (+)
mamdc2a LOC106570826 coding upstream 104771 76889699 ~ 76939449 (+)
LOC110536409 LOC106570807 coding upstream 187856 76848974 ~ 76856364 (+)
LOC110535120 LOC106570830 coding downstream 35279 77082954 ~ 77125426 (+)
LOC110536414 NA coding downstream 83751 77131426 ~ 77139724 (+)
LOC110536415 LOC106570831 coding downstream 92283 77139958 ~ 77149206 (+)
fam169aa LOC106570833 coding downstream 152696 77200371 ~ 77240298 (+)
LOC118937406 LOC106570833 coding downstream 192654 77212084 ~ 77263832 (+)
G1019257 NA non-coding upstream 1373 77041632 ~ 77042847 (+)
G1019251 NA non-coding upstream 106605 76937230 ~ 76937615 (+)
G1019246 NA non-coding upstream 123413 76916938 ~ 76920807 (+)
G1019242 NA non-coding upstream 137000 76904079 ~ 76907220 (+)
G1019226 NA non-coding upstream 163429 76878106 ~ 76880791 (+)
G1019304 NA non-coding downstream 2061 77049736 ~ 77050232 (+)
G1019314 NA non-coding downstream 13184 77060859 ~ 77062449 (+)
G1019319 NA non-coding downstream 18942 77066617 ~ 77067990 (+)
G1019513 NA non-coding downstream 82821 77130496 ~ 77130699 (+)
G1019189 ptar1 other upstream 222252 76818505 ~ 76821968 (+)
LOC110536406 LOC106570821 other upstream 498799 76396096 ~ 76600566 (+)
G1018678 NA other upstream 518653 76524138 ~ 76525567 (+)
G1017593 NA other upstream 1715483 75269723 ~ 75328737 (+)
LOC110536420 NA other downstream 360354 77407991 ~ 77410527 (+)
G1019753 NA other downstream 420554 77468229 ~ 77469925 (+)
G1019804 fam151b other downstream 568655 77605155 ~ 77618204 (+)
G1019999 NA other downstream 677860 77725535 ~ 77726062 (+)

Expression


Co-expression Network