LOC110535120 (LOC106570830)


Basic Information

Item Value
gene id LOC110535120
gene name LOC106570830
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 77082954 ~ 77125426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936346.1
AGGTGTAGGCTGCTATGCTGGCCTGGAACAACGACTTTCACCTCTCTAAAACCGGAATGGTTTTGGTAAACACTGCTTTTAAGATAAAATATTTTTGGTGACCACTCGTTTTGATTGGAGGCTGAGTGAGGGCCATTGCCAAATCAGGCTCAATCTCAGAGTTTTTCAAATGTAGGCCTAATATTATATTTGGCGCAATCTTTTTTCCTGCCATGGGAAAACAAGGGATACTGTTGTAGACTACTCAGTCTGCTACGCCCTCTTGTGGCAGAAAAAAAAGTATTTCCACTTTTCTCCAATTTGGCAAGGAACGTCTACCAGGAACGCCTACCAGGAACGCCCTAGAGACAGTCTGCAGTCACACTTTTTCTCTTTTCGCGCGCTACTCTCATCCGTTACTAATCCAAACTAGTAACGTCGACGTGGTTGGCTAGCTAGATGTAAATATTGACTAATTGGAAATTTATCACACATGTTATGGAGACAAGTTGCTTCTCTGATATCGACAATGAGTCGGCGTCAATTGTTGGTGATTctgaaggagaagaagaaacaaATCTTTACCTGGACAGATTGATGCTTGCAGATTTGCTAGACTCGCCCTACTCATATAATTTGTCCACACCACACACCATCAATGGCTGTACAGACGGGTTTTCTCCTCAGATAGCGATGTTGACTTGTAGACGTTTGGATGGCTTGGACCAAGTGCGTCTCACACCTGAAAAGATCCAATCCCCATTTTTGTCAAGGAGTTCTGGGAATCCAGGTGACGAGAAGGGAATGGACGGTGTTATCGCTCAAGGACatgatggagAAGACAGTGAGGGGATGATAGAAGAGGATCCCTCTGAGGGGTCAGTGTCAGAGAGTCCCTCACAGCACGTTGGGAGTGGTACCTCTACCAGACGTTTGAAGAGAGCAGCCACGGTAGCTAAGACACAGGGTGGCGGTGGTTGTGACCTCTCACAGAAGGAGATAGGTGCAGAGCCCAAGAGACAGACCAGGCTGACTGACAGTCAGACACAGGGGAGTAGACAGACCAGACCAATGGAAGAAATCAGACCAAACGGACAGAATGACAACCAGGCACAGGAGAACAAACAGGAGAACAGACAGACCAGGCAGACTGATAGTCAGAAGCAGGAGACCAGCGGACCAACCAGACAGACCAGGCAGACTGACAGCCAGAAGCAGGAGCCCAGCGGACCAACCAGACAGACCAGGCAGACTGACAGCCAGAAGCTGGAGACCAGCGGACcaaccagacagactgacagtcagAAGCAGGAGACCAGCGGACCAACCAGACAGACCAGGCAGACTGACAGCCAGAAGCAGGAGCCCAGCGGACCAACCAGACAGACCAGGCAGACTGACAGCCAGAAGCAGGAGACCAGCGGACcaaccagacagactgacagtcagAAGCAGGAGACCAGCGGACCAACCAGACAGACCAGGCAGACTGACAGTCAGAAGCAGGAAACCAGCGGACCAACCAGACAGACCAGGCAGACTGACAGCCAGAAGCTGGAGACCAGCGGACCAACCAGACAGACCAGGCACACTGACAGCCAGAAGCTGGAGACCAGTGGACCAACCAGACAGACCAGGCAGACTGACAGCCAGAAGCAGGAGACCAGCGGACcaaccagacagactgacagccaGAAGCAGGAGACCAGCGGACcaaccagacagactgacagccaGAAGCAGGAGACCAGCGGACcaaccagacagactgacagccaGAAGCAGGAGACCAGCGGACcaaccagacagactgacagtcagAAGCAGGAGACCAGCGGACCAATCAGACAGACCAGGCAGACTGACAGTCAGAAGCAGGAAAATGGAGGTGTGAACCACGGTCAATCCCATAGCAGGCGGGGCATCACCCGTCTGAATGCCCTCCACCGGAGGAACCGTTACGGGGAGACTCTACTCCATATTGCAGCCATGCAAGGAGACACCCAGTGGATCAGAGGCATGCTGTCGCTGGGCCCCGACATCAACATGGCCGACAACGCAGGTTGGACTCCTCTTCACGAGGCAGTGTCCCACGGTCACTATGAGATCAGTAAGCACCTGATCCAGGCAGGAGCTCTGGTCAACTGTACTGGAGAAAATGGAACCACACCTCTACTTGATGCTGTAGTGCAGGGACACCTGCAGATAGCAGAGTTGCTGTTGAAGCACGGGGCAGACCCTCTACTGAAGAACAATGAAGGACAGACAGCCTATAGCAACACCACAGAACCCTGTCTGATCAAACTCATGGAGAAAAACATCCCCAATAACAAGAGAAAGGCACTAGCAGGAAGAAGCGTTGAGAGGTCAAGAGCAGGAGAACCCATGAGACCGTTGAGGTCCGTGTCCGAGGGCACTGTGTCCAGGAACATCTCTGGGGGGTCCCAGAGCGGGCGGACCGTCACCCCTCTGAATATCCTCCACCGGAAGAACTGTTACGGGGAGACTCTACTCCACATTGCAGCCATTCAAGGAGACACCCAGGGGGTCAGAGACATGCTGTCACAGGGGCTCAACGTCAACATGCCCGATAATGCAGGTTGGACTCCTCTTCACGAGGCAGTGTCCCACGGTCACTATGAGATCAGTAAGCACCTGATCCAGGCAGGAGCTTTGGTCAACTGTACTGGAGAAAATGGAACCACACCTCTACTTGATGCTGTAGTGCAGGGACACCTGCAGATAGCAGAGTTGCTGTTGAAGCACGGGGCAGACCCTCTACTGAAGACAAACAACGGACAGACAGCCTTTAGCAACACCACAGAACCCTCTCTGATTAAACTCTTGGAGAAAAACATCCCCAAGAACAAGAGAAAGGCACTAGCAGCACCAACAAAACGACCTGCAGACGCGTCCCAACTCAGCCCGTCCCAAAGTGGAACAGGGAGAAAGCTCAGGAGGTTACCAGTTCAGGCAGATCAGACCAGCACTGACCAGGAGAGATACCAGCAGAGACGCACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCACAACAACCAGGTCTGAAACCTGCAACACTGACCAACAGAGACGCACAACAACCAGGTCTGAAACCTGCAACACTGAACAGCAGAGAGACACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCACAACAACCAGGTCTGAAACCTGCAACACTGACCAACAGAGACGCACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGGACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCACAACAACCAGGTCTGAAACCATCAACACTGACCAGCAGAGACGCACAACAACCAGATCTGAAACCAGCAACACTAACCAGCAGAGACGCACAACAACCGGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCCCACCAACCAGGTCTGAAACCTGCAACACTGAACAGCAGAGAGACACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGGACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCACAACAACCAGGTCTGAAACCAGAAACACTGACCAGCAGAGAGACACAACAACCAGGGCTGAAGCCAGCAACACTGAACAGCAGAGACGGACAACAACCAGGTCTGAAACCAGCAACACTGAACAGCAGAGAGACACAACAACCAGGTCTGGAACCAGCAACACTGACCAGCAGAGAGACACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGGACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGGACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGAGACACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGGACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGACGCACAACAACCAGGTCTGAAACCAGCAACACTGACCAGCAGAGAGACACAACAACCTCTACTAAAGTTGCAGGGGTcttgggagagaaagaggagcctCGTGGCGATGGCTCTACTGGTCCAAACCGTCCACTACCTTCTGTCCAGGATGGGATGCGGTCTACAGCACCAGCTATGAAGAGGAACCTGGAGGACCAGGCAGGGGAAGAAGACTCGAGGCCTAATCACGCCATTTTATCAGACACATCCACACCTAGAAAAGTCATTAAACGCATCACCACCAAACGGAAGGATATCTTTGATTTGCTCCTGCAGAGCAACCCTTTCGACCTGGACAGTGTTCTATTGGCGGCCCAGACAGGAAATGGTCAGGCGACAACAGGAAGTGCAGGTTTCCTGCTGGAGACAGCAGATTTCAAAGGAAAAGAGGAAGGAAAGGAATGGAACACAGAAAAGCAGGAAATTACACAATCCTCAGAGGAGATCACTCTAGATGGGAATCTCTCCCAGCATACCGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATATCTCCCAGCATACCGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACCGACCACTGCcggagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACCGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACCGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACCGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACCGACCACTGCCAGAGAGAGGAGATCACTCTAGATGGGAATCTCTCCCAGCATACTGACCACTGCCAGAGAGAGGAGCTCACTCTAGATGGGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACCGACCACTGCCAGAGAGAGGAGCGCACTCTAGATGGGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagataacTCTAGATGGGAATCTCTCCCAGCATACTGACCACTGCCAGAGAGAGGAGATCACTCTAGATGGGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagataacTCTAGATGGGAATCTCTCCCAGCATACTGACCACTGCCAGAGAGAGGAGATCACTCTAGATGGGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACTGACCACtgccagagagaggagataacTCTAGATGGGAATCTCTCCCAGCATACCGACAActgccagagccagagagaggagatcaCTCTAGATGGGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagcTAACTAAAGATGGGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagatcaCTCTAGATAGGAATCTCTCCCAGCATACTGACCACTGCCAGAGAGAGGAGATCACTCTAGATGGGAATCTCTCCCAGCATACCGACCActgccagagccagagagaggagatcaCTCTAGATACGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagatcaCTCTAGATATGAATCTCTCCCAGCATACTGACCActgccagagccagagagaggagataacTCTAACTCAAGAGGGGCATCTTTCCCAGCATACTGACCACACAGACGAAGCAGGGTTCAATCTAGGTGAATATTTCAATTTTAACCCAACAACGAGTGCTGACAGATACCAACACAATAACACTATCTGGGCAGAGGAAACCAGTCAAAACCCTGACCAGAATACATGTCCTGAAGCCTTAGTGCCGCTAGCTGGATTGGATGCCACAAGAAACAGCATCTCCACCGATAAGTCAAAGGTCACCCTCACCCACCGACCTGCTAGACCAGAGACTGACCCTGTGGACAAGACCAGATCTGCGGTAGAGGTTGACCTGAGCCAAATAGACCAGGATGACACCTGCTGTACCCTCATAGACAACGTCTCACTTGTTGAACACCTGTCCCTGTCCAAAGCACCTGTCCCTTTGGAAACCACTGACGTTGTGAATGCCTGTGTGGCTGGGACATCATCTCCATATGTTGATGACAAGTGTAAGCTAGACAATGGTCTCCTGTCCAATGAAGACTTGGAGGAGCAGTGTAGCGTGTCTCTTCTTCCGCCTCATTCAGACGCTACAGCAACAACACACCTGGATGTCACGAGACAAGCTTCCATTGTTGACGAGAAGCAGACACAACCAGTAGAGGCACCATCAGCGATGGAGGATGATAATGATGAATATCTTGGCTCTTGCAACACTAGCTCACCATCCCTCCTAGTGGCTGAGGAGCTCCACGGCCCTGTGGGGATATCAGAATGTACAGAGACCAATATCGATACACTGTTTATGCAGAGAGCAAGTCAAATCCCCAAAGCTTCTTCCATTGGATCAGATGTCGGTTTAAAAGCCAACCTGCTAAAATGCACTGGTCTCGATCTCCAGCTGATTGGAGACAGACTGAACAGAGAGACCACGGCTGCTGTGACTGGAAGAGATGGTGAGAGATGTCATATTGATGGTGGACAACGGGAGGGAGGCTCTGTAACACACAGAGTGTCTAGAGACCCGGATGCTTCTACTGACAAGACTTTGTCTTCCGACAATAAAGACAATGGCGCTGACTCTGACATCACCGTGGTCTCTGAGCTGGACCAAGCAGAGACAAAGAACAATGATCTGGAACAAGTTGAAAAGGAGGAGGTGGCGAAAGCTCATGTTCAACTTGATTCAGAAGCGACAATTGGTTCCGTCCAAGATCAGGTGAGAGGAGTAGAAAACCAAACCCCCGGGACTGAAGTTGAGACTTTAGATACATTAATAGATTACTCTGAGGCGTGTGAGATGAATGGTAATGGATATACCACTACTGTAATGGAGGACTCCACTAGCCTGTTACCCGCTTTAGATGACTGCCAAGCTAAAGACGGTGTGAAGGAAGATGAACCAGAGATGAACACTATGCAAAGTGATACGGGCCGCGCCAAACACCACAACAGCTGTAGTCAACACAAGAGGAAAGCCAAGAGCAGTAGAGCCAGACCTGGCAAGAGGCAGGCCAAGCTGTTGTTGAAGCCAAAGCCAAACCCTTGGGCATCGCAAAACAGAAGTACTAGTTACACAACAGGTGGTGCTGATACCTCGTCTAGTTCAGTAGGTCCCATGCCTGGCACAAAGATTCCCTTGAGGAATCTACACAGGAGAAACAGTATGGGAGAGAGCCACCTTCACCTGGCATGCAAGAAAGGAGACCTGGCTCTAGTGAGAGGCCTTCTGGAAGCAGGCCTAAATGTCAATCAGATAGATCACGCAGGTTTGTAA
>TU1159417
CTCTCATCCGTTACTAATCCAAACTAGTAACGTCGACGTGGTTGGCTAGCTAGATGTAAATATTGACTAATTGGAAATTTATCACACATGTTATGGAGACAAGTTGCTTCTCTGATATCGACAATGAGTCGGCGTCAATTGTTGGTGATTctgaaggagaagaagaaacaaATCTTTACCTGGACAGATTGATGCTTGCAGATTTGCTAGACTCGCCCTACTCATATAATTTGTCCACACCACACACCATCAATGGCTGTACAGACGATCCAATCCCCATTTTTGTCAAGGAGTTCTGGGAATCCAGGTGACGAGAAGGG

Function

NR:

description
uncharacterized protein LOC109894963

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936346.1 False 7701 mRNA 0.52 18 77082954 77125426
TU1159417 True 320 lncRNA 0.43 4 77083339 77089086

Neighbor

gene id symbol gene type direction distance location
LOC110536412 LOC106570827 coding upstream 47518 77015447 ~ 77035436 (+)
LOC110536652 NA coding upstream 72107 77009570 ~ 77010847 (+)
slc39a14 slc39a14 coding upstream 91147 76943720 ~ 76991807 (+)
mamdc2a LOC106570826 coding upstream 143505 76889699 ~ 76939449 (+)
LOC110536409 LOC106570807 coding upstream 226590 76848974 ~ 76856364 (+)
LOC110536414 NA coding downstream 6000 77131426 ~ 77139724 (+)
LOC110536415 LOC106570831 coding downstream 14532 77139958 ~ 77149206 (+)
fam169aa LOC106570833 coding downstream 74945 77200371 ~ 77240298 (+)
LOC118937406 LOC106570833 coding downstream 114903 77212084 ~ 77263832 (+)
LOC110536417 LOC106570834 coding downstream 145085 77270511 ~ 77282137 (+)
G1019319 NA non-coding upstream 14964 77066617 ~ 77067990 (+)
G1019314 NA non-coding upstream 20505 77060859 ~ 77062449 (+)
G1019304 NA non-coding upstream 32722 77049736 ~ 77050232 (+)
G1019303 NA non-coding upstream 35279 77044220 ~ 77047675 (+)
G1019257 NA non-coding upstream 40107 77041632 ~ 77042847 (+)
G1019513 NA non-coding downstream 5070 77130496 ~ 77130699 (+)
G1019514 NA non-coding downstream 7845 77133271 ~ 77133579 (+)
G1019515 NA non-coding downstream 9781 77135207 ~ 77135435 (+)
G1019516 NA non-coding downstream 11436 77136862 ~ 77137067 (+)
G1019189 ptar1 other upstream 260986 76818505 ~ 76821968 (+)
LOC110536406 LOC106570821 other upstream 537533 76396096 ~ 76600566 (+)
G1018678 NA other upstream 557387 76524138 ~ 76525567 (+)
G1017593 NA other upstream 1754217 75269723 ~ 75328737 (+)
LOC110536420 NA other downstream 282603 77407991 ~ 77410527 (+)
G1019753 NA other downstream 342803 77468229 ~ 77469925 (+)
G1019804 fam151b other downstream 490904 77605155 ~ 77618204 (+)
G1019999 NA other downstream 600109 77725535 ~ 77726062 (+)

Expression


Co-expression Network