G1019515


Basic Information

Item Value
gene id G1019515
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 77135207 ~ 77135435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1159644
ATCATGTTTAATAAACTGTAGAACTGTTGGCTGTCGTGGTCAACATACTGAATCTTATCTGATTCTAGGGCGTGTCTGCTGTCCTAGACTTGTTGGTGCATTGTGGGCCGTAGAGCTGAATGTTGTCTTGGCTGACGAAGGCTGCTATGTGGTACATTGAAAGAGGATTGCTTCATGAGATAGACATAACCATCTATAGATTTATAGTGATTTTATTATTGATTTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1159644 True 229 lncRNA 0.40 1 77135207 77135435

Neighbor

gene id symbol gene type direction distance location
LOC110535120 LOC106570830 coding upstream 9781 77082954 ~ 77125426 (+)
LOC110536412 LOC106570827 coding upstream 99771 77015447 ~ 77035436 (+)
LOC110536652 NA coding upstream 124360 77009570 ~ 77010847 (+)
slc39a14 slc39a14 coding upstream 143400 76943720 ~ 76991807 (+)
mamdc2a LOC106570826 coding upstream 195758 76889699 ~ 76939449 (+)
LOC110536415 LOC106570831 coding downstream 4523 77139958 ~ 77149206 (+)
fam169aa LOC106570833 coding downstream 64936 77200371 ~ 77240298 (+)
LOC118937406 LOC106570833 coding downstream 104894 77212084 ~ 77263832 (+)
LOC110536417 LOC106570834 coding downstream 135076 77270511 ~ 77282137 (+)
LOC110536420 NA coding downstream 272556 77407991 ~ 77410527 (+)
G1019514 NA non-coding upstream 1628 77133271 ~ 77133579 (+)
G1019513 NA non-coding upstream 4508 77130496 ~ 77130699 (+)
G1019319 NA non-coding upstream 67217 77066617 ~ 77067990 (+)
G1019314 NA non-coding upstream 72758 77060859 ~ 77062449 (+)
G1019516 NA non-coding downstream 1427 77136862 ~ 77137067 (+)
LOC110536414 NA non-coding downstream 3614 77131426 ~ 77139724 (+)
G1019546 NA non-coding downstream 41541 77176976 ~ 77177200 (+)
G1019548 NA non-coding downstream 45826 77181261 ~ 77181780 (+)
G1019559 NA non-coding downstream 58849 77194284 ~ 77195276 (+)
G1019189 ptar1 other upstream 313239 76818505 ~ 76821968 (+)
LOC110536406 LOC106570821 other upstream 589786 76396096 ~ 76600566 (+)
G1018678 NA other upstream 609640 76524138 ~ 76525567 (+)
G1019753 NA other downstream 332794 77468229 ~ 77469925 (+)
G1019804 fam151b other downstream 480895 77605155 ~ 77618204 (+)
G1019999 NA other downstream 590100 77725535 ~ 77726062 (+)
G1020031 NA other downstream 661314 77796749 ~ 77802459 (+)

Expression


Co-expression Network