Gene
RNA
| Item | Value |
|---|---|
| gene id | G1019548 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 77181261 ~ 77181780 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1159682 | True | 520 | lncRNA | 0.39 | 1 | 77181261 | 77181780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536415 | LOC106570831 | coding | upstream | 32055 | 77139958 ~ 77149206 (+) |
| LOC110536414 | NA | coding | upstream | 41537 | 77131426 ~ 77139724 (+) |
| LOC110535120 | LOC106570830 | coding | upstream | 55835 | 77082954 ~ 77125426 (+) |
| LOC110536412 | LOC106570827 | coding | upstream | 145825 | 77015447 ~ 77035436 (+) |
| LOC110536652 | NA | coding | upstream | 170414 | 77009570 ~ 77010847 (+) |
| fam169aa | LOC106570833 | coding | downstream | 18591 | 77200371 ~ 77240298 (+) |
| LOC118937406 | LOC106570833 | coding | downstream | 58549 | 77212084 ~ 77263832 (+) |
| LOC110536417 | LOC106570834 | coding | downstream | 88731 | 77270511 ~ 77282137 (+) |
| LOC110536420 | NA | coding | downstream | 226211 | 77407991 ~ 77410527 (+) |
| LOC118937409 | LOC106570836 | coding | downstream | 358872 | 77540652 ~ 77542715 (+) |
| G1019546 | NA | non-coding | upstream | 4061 | 77176976 ~ 77177200 (+) |
| G1019516 | NA | non-coding | upstream | 44194 | 77136862 ~ 77137067 (+) |
| G1019515 | NA | non-coding | upstream | 45826 | 77135207 ~ 77135435 (+) |
| G1019514 | NA | non-coding | upstream | 47682 | 77133271 ~ 77133579 (+) |
| G1019559 | NA | non-coding | downstream | 12504 | 77194284 ~ 77195276 (+) |
| G1019552 | NA | non-coding | downstream | 100576 | 77282356 ~ 77284236 (+) |
| G1019581 | NA | non-coding | downstream | 104678 | 77286458 ~ 77287827 (+) |
| G1019591 | NA | non-coding | downstream | 120739 | 77302519 ~ 77302769 (+) |
| mamdc2a | LOC106570826 | other | upstream | 270882 | 76889699 ~ 76939449 (+) |
| G1019189 | ptar1 | other | upstream | 359293 | 76818505 ~ 76821968 (+) |
| LOC110536406 | LOC106570821 | other | upstream | 635840 | 76396096 ~ 76600566 (+) |
| G1019753 | NA | other | downstream | 286449 | 77468229 ~ 77469925 (+) |
| G1019804 | fam151b | other | downstream | 434550 | 77605155 ~ 77618204 (+) |
| G1019999 | NA | other | downstream | 543755 | 77725535 ~ 77726062 (+) |
| G1020031 | NA | other | downstream | 614969 | 77796749 ~ 77802459 (+) |
