LOC110486357 (LOC100135791)


Basic Information

Item Value
gene id LOC110486357
gene name LOC100135791
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73640772 ~ 73641980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036938350.1
GCTGCTCAAACGAAGACAAAGTGTAAATGATTCGTTAGCCTCTGCGAAAGAAACTTCAACAGCTAGCAACATGGTTCAGTGGACAGACTTTGAGCGCGCCACCATTCAGAGCGTCTTCGAGAAGATGGACTACGATGACGTTGGGCCCGCGGCTCTTTCCAGGTGTCTGGTTGTGTACCCCTGGACCCAGAGGTATTTCGGTAACTTTGGAAACCTGTACAACGCCGCTGCCATCCAGGGAAACCCAATGGTCGCCGCTCACGGAAAGACCGTCCTGCGCGGACTGGACCGGGCTGTCAAGAACATGGATGACATCAAGGCCACCTACGCAGAGCTGAGCGTGCTGCACTCCGAGAAACTGCGCGTGGATCCCGACAATTTCAGGCTGCTGGCTGACTGCCTTACTATTGTCGTAGCTGCGAGAATGGGTGCTGACTTCACCGCTGATGTCCAGGGCGCTTTCCAGAAGTTCCTGGCCGTCGTGGTGAGCTCCCTGGGCAGACAGTACCACTAGAGCCCCTCCACTCAGAGACCGACGACCACCAGAGAACCAACAAGCGCAGATCATTTGTTTAGAGGCACATGTTGTTCCTTCTACTAAAGCAAATAAAATCTTCCGCAAAT
>XM_036938349.1
GCTGCTCAAACGAAGACAAAGTGTAAATGATTCGTTAGCCTCTGCGAAAGAAACTTCAACAGCTAGCAACATGGTTCAGTGGACAGACTTTGAGCGCGCCACCATTCAGAGCGTCTTCGAGAAGATGGACTACGATGACGTTGGGCCCGCGGCTCTTTCCAGGTGTCTGGTTGTGTACCCCTGGACCCAGAGGTATTTCGGTAACTTTGGAAACCTGTACAACGCCGCTGCCATCCAGGGAAACCCAATGGTCGCCGCTCACGGAAAGACCGTCCTGCGCGGACTGGACCGGGCTGTCAAGAACATGGATGACATCAAGGCCACCTACGCAGAGCTGAGCGTGCTGCACTCCGAGAAACTGCGCGTGGATCCCGACAATTTCAGGCTGCTGGCTGACTGCCTTACTATTGTCGTAGCTGCGAGAATGGGTGCTGACTTCACCGCTGATGTCCAGGGCGCTTTCCAGAAGTTCCTGGCCGTCGTGGTGAGCTCCCTGGGCAGACAGTACCACTAGAGCCCCTCCACTCAGAGACCGACGACCACCAGAGGACCAACAAGCCCGGAGGACCAACAAGCTCAGAGGACCAACAAGCTCAGAGGACCAACAAGCTCAGAGAACCAACAAGCGCAGATCATTTGTTTAGAGGCACATGTTGTTCCTTCTACTAAAGCAAATAAAATCTTCCGCAAATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036938350.1 False 624 mRNA 0.54 4 73640772 73641979
XM_036938349.1 True 693 mRNA 0.54 3 73640772 73641980

Neighbor

gene id symbol gene type direction distance location
LOC110538438 LOC100135791 coding upstream 4788 73634721 ~ 73635984 (+)
LOC110538437 LOC106601064 coding upstream 10843 73628653 ~ 73629929 (+)
LOC110538447 LOC106601071 coding upstream 20316 73619244 ~ 73620456 (+)
LOC110538449 hba1 coding upstream 27296 73608654 ~ 73613476 (+)
hba4 hba4 coding upstream 38801 73601060 ~ 73601971 (+)
LOC100135791 LOC100135791 coding downstream 4812 73646792 ~ 73647950 (+)
LOC110538436 LOC100135791 coding downstream 10886 73652866 ~ 73653837 (+)
LOC110538972 NA coding downstream 16648 73658628 ~ 73659374 (+)
LOC100136590 LOC100136590 coding downstream 22104 73664084 ~ 73664907 (+)
LOC118937734 LOC106601065 coding downstream 36846 73678826 ~ 73679713 (+)
G1109618 NA non-coding upstream 30626 73609567 ~ 73610146 (+)
G1109647 LOC106589010 non-coding upstream 33789 73605619 ~ 73606983 (+)
G1109606 NA non-coding upstream 45080 73581659 ~ 73595692 (+)
G1109607 NA non-coding upstream 50093 73566043 ~ 73590679 (+)
G1109608 LOC106607371 non-coding upstream 79460 73560328 ~ 73561312 (+)
G1109688 LOC100135791 non-coding downstream 42883 73684863 ~ 73692904 (+)
G1109696 NA non-coding downstream 69399 73711379 ~ 73713876 (+)
G1109697 NA non-coding downstream 74785 73716765 ~ 73718069 (+)
G1109721 NA non-coding downstream 97115 73739095 ~ 73739315 (+)
G1109722 NA non-coding downstream 97511 73739491 ~ 73739711 (+)
LOC110538462 rpc11 other upstream 254905 73384755 ~ 73386199 (+)
G1109505 NA other upstream 334618 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1622482 72016045 ~ 72019145 (+)
psmg3 psmg3 other upstream 1697973 71941515 ~ 71942804 (+)
G1105655 NA other upstream 2734343 70902905 ~ 70906429 (+)
G1109778 NA other downstream 191663 73833643 ~ 73834606 (+)
G1109786 NA other downstream 204275 73846255 ~ 73846794 (+)
G1111126 LOC106578813 other downstream 1318286 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1776809 75418789 ~ 75423163 (+)
G1111961 NA other downstream 2103159 75745139 ~ 75745620 (+)

Expression


Co-expression Network