G1062938


Basic Information

Item Value
gene id G1062938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 33872415 ~ 33872682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1210794
gtaaatagcccacccaatctacctaccccatccccatactgtttttattttatttacttttctgctcttttgcacaccagtatctctacttgcacatcatcatctgctcatttatcactccagtgttaatctgctaaattctAATTATTTTctcctcctcatgccttttgcacactgtatatagactttcttttttctactgtgtcattgacttgtttattgtgttattggcttgtttattgtttactccatgtgtaactctgtgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1210794 True 268 lncRNA 0.36 1 33872415 33872682

Neighbor

gene id symbol gene type direction distance location
ptrh2 ptrh2 coding upstream 87798 33782814 ~ 33784617 (+)
rnft1 LOC106567963 coding upstream 248392 33598939 ~ 33624023 (+)
LOC110537474 NA coding upstream 358761 33501934 ~ 33513654 (+)
cxadr LOC106567957 coding upstream 1257425 32555056 ~ 32614990 (+)
btg3 btg3 coding upstream 1317759 32546918 ~ 32554656 (+)
LOC110537484 LOC106567971 coding downstream 333 33873015 ~ 33880271 (+)
abr LOC106567975 coding downstream 261826 34134508 ~ 34360009 (+)
LOC110537489 LOC106567978 coding downstream 541706 34414388 ~ 34547258 (+)
LOC118937666 NA coding downstream 613392 34486074 ~ 34490407 (+)
LOC110537491 adora2b coding downstream 680903 34553585 ~ 34566592 (+)
G1062771 NA non-coding upstream 52180 33819513 ~ 33820235 (+)
G1062781 NA non-coding upstream 59696 33775172 ~ 33812719 (+)
G1062766 NA non-coding upstream 80399 33790658 ~ 33792016 (+)
G1062776 NA non-coding upstream 104369 33767779 ~ 33768046 (+)
G1062775 NA non-coding upstream 106522 33765668 ~ 33765893 (+)
G1063007 NA non-coding downstream 120063 33992745 ~ 33996676 (+)
G1063064 NA non-coding downstream 199921 34072603 ~ 34095927 (+)
G1062648 NA other upstream 210466 33658278 ~ 33661949 (+)
G1062537 NA other upstream 363552 33508319 ~ 33508863 (+)
G1062404 NA other upstream 506166 33359734 ~ 33366249 (+)
G1060470 NA other upstream 2061068 31811062 ~ 31811347 (+)
G1059685 LOC106567926 other upstream 2663058 31207629 ~ 31209357 (+)
ubb ubb other downstream 894342 34766968 ~ 34770882 (+)
LOC110537506 LOC106567992 other downstream 1103610 34964222 ~ 34982028 (+)
LOC110524522 LOC106605670 other downstream 1597818 35468060 ~ 35471779 (+)
G1064849 NA other downstream 1615056 35487738 ~ 35488944 (+)
G1065619 NA other downstream 2519952 36392634 ~ 36393022 (+)

Expression


Co-expression Network