G1063549


Basic Information

Item Value
gene id G1063549
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 34861460 ~ 34865819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1211477
CCTACTATTGAAATGAAATCTGAGGGACTAAAATGGAAAAAGACATGGAATACAGTCTTATCTAAGGAAATCATTCAAGCAATCAGGGGGTAACACTATAAACCtcaatgggggaGGGGGGTAGGGGCTGTAGCGCTGGCCTGAAGTATCCAGCCCGTTGACTGTGCGGCGCACGTGGTTCCTCTGGGGGACCTTGACACTGTTGGGGAAGATCTTGATGGTCAGGGGGTTGTTGGCAATCTTCTTAGCATAAGCATCCAATTCCGCAGGGGTTGGATACTGAGCGGATCTCATCCTCTGTGTAGTGTCC

Function

NR:

description
PREDICTED: protein FAM222B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1211477 True 310 lncRNA 0.50 2 34861460 34865819

Neighbor

gene id symbol gene type direction distance location
shpk shpk coding upstream 40379 34807649 ~ 34821081 (+)
LOC110537497 p2rx5 coding upstream 55991 34778005 ~ 34805469 (+)
ubb ubb coding upstream 90578 34766968 ~ 34770882 (+)
pigl pigl coding upstream 108019 34725810 ~ 34753441 (+)
LOC110537491 adora2b coding upstream 294868 34553585 ~ 34566592 (+)
eral1 eral coding downstream 89170 34954989 ~ 34959604 (+)
LOC110537506 LOC106567992 coding downstream 98403 34964222 ~ 34982028 (+)
si:ch211-283g2.1 LOC106567993 coding downstream 175616 35041435 ~ 35069666 (+)
LOC110537511 fam114a2 coding downstream 541018 35406837 ~ 35418103 (+)
LOC110537512 cnot8 coding downstream 552483 35418302 ~ 35421957 (+)
G1063519 NA non-coding upstream 36802 34824445 ~ 34824658 (+)
G1063507 emc6 non-coding upstream 53830 34805738 ~ 34807630 (+)
G1063408 NA non-coding upstream 174277 34663563 ~ 34687183 (+)
G1063410 LOC106603505 non-coding upstream 190998 34665968 ~ 34670462 (+)
G1063552 NA non-coding downstream 68803 34934622 ~ 35022695 (+)
G1063601 NA non-coding downstream 95788 34961607 ~ 34962942 (+)
G1064355 NA non-coding downstream 170864 35036683 ~ 35036989 (+)
G1064373 LOC106567994 non-coding downstream 205918 35071737 ~ 35080332 (+)
G1064377 NA non-coding downstream 211104 35076923 ~ 35081585 (+)
G1062648 NA other upstream 1199511 33658278 ~ 33661949 (+)
G1062537 NA other upstream 1352597 33508319 ~ 33508863 (+)
G1062404 NA other upstream 1495211 33359734 ~ 33366249 (+)
G1060470 NA other upstream 3050113 31811062 ~ 31811347 (+)
LOC110524522 LOC106605670 other downstream 604681 35468060 ~ 35471779 (+)
G1064849 NA other downstream 621919 35487738 ~ 35488944 (+)
G1065619 NA other downstream 1526815 36392634 ~ 36393022 (+)
G1065620 NA other downstream 1527439 36393258 ~ 36393845 (+)

Expression


Co-expression Network