G1081684


Basic Information

Item Value
gene id G1081684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 48988935 ~ 48989137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1231026
AAGGAAGtaggagtagcagtggtccagtgTTTCGCTCGAGTGGGTACTGCAGTCAATGTGctggtagaatttaggtagccttgttctcatattagctttgttaaaatcctcagctacaataaatgcagcctcatgatatctggtttccagtttacatagagtccagtgaagttctttcaggtcCGTCGAGGTATCtacttggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1231026 True 203 lncRNA 0.44 1 48988935 48989137

Neighbor

gene id symbol gene type direction distance location
LOC110537709 LOC106567546 coding upstream 83656 48781287 ~ 48905279 (+)
LOC110538905 LOC106567547 coding upstream 406235 48281750 ~ 48582700 (+)
LOC110537708 LOC106567614 coding upstream 997479 47988095 ~ 47991456 (+)
LOC110537707 NA coding upstream 1013069 47952857 ~ 47975866 (+)
LOC110537705 LOC106567550 coding upstream 1106620 47869876 ~ 47882315 (+)
LOC110537711 LOC106567544 coding downstream 123191 49112328 ~ 49141086 (+)
LOC110537712 LOC106567543 coding downstream 178412 49167549 ~ 49209751 (+)
LOC110537713 LOC106567542 coding downstream 273005 49262142 ~ 49300347 (+)
tmem126a tmem126a coding downstream 683950 49673087 ~ 49674977 (+)
ccdc83 ccdc83 coding downstream 701486 49690623 ~ 49700822 (+)
G1081681 NA non-coding upstream 1916 48986744 ~ 48987019 (+)
G1081671 LOC100136012 non-coding upstream 13939 48974514 ~ 48974996 (+)
G1081664 NA non-coding upstream 25475 48963241 ~ 48963460 (+)
G1081595 NA non-coding upstream 66436 48922280 ~ 48922499 (+)
G1081587 NA non-coding upstream 70300 48918100 ~ 48918635 (+)
G1081931 NA non-coding downstream 160321 49149458 ~ 49149694 (+)
G1081934 NA non-coding downstream 161489 49150626 ~ 49150862 (+)
G1081938 NA non-coding downstream 166495 49155632 ~ 49156672 (+)
G1081939 NA non-coding downstream 168481 49157618 ~ 49162954 (+)
G1081353 NA other upstream 241436 48746955 ~ 48747499 (+)
G1077322 NA other upstream 2980326 46004151 ~ 46008609 (+)
nrgna NA other upstream 3068674 45900621 ~ 45920265 (+)
G1077158 NA other upstream 3375170 45611545 ~ 45613765 (+)
G1075958 NA other upstream 4513269 44473748 ~ 44475666 (+)
G1082266 NA other downstream 689886 49679023 ~ 49680804 (+)
G1086237 LOC106567502 other downstream 3660467 52649604 ~ 52657495 (+)
G1087914 NA other downstream 5120553 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 5285169 54253719 ~ 54283905 (+)

Expression


Co-expression Network