G1088992


Basic Information

Item Value
gene id G1088992
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 54992764 ~ 55001431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1238770
tcacagccctgagttaatactttgttgaagcccctatggcagcgattacagctgtgagtctttctggataagtctctaagtgtcacgacttccgccgaagtcggtccctctccttgttcgggcgacgttcggcggtcgacgtcaccgaacttctagccatcgccgatccacttttcattttccattggttatgtcttgtcttccatcacacctggttccaattccatcaattacatgttgtgtatttaaccctctgttccccccatgtccttgtctgtaattgtttgttgtcagtgcttgtgcacgttatgtTC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1238770 True 314 lncRNA 0.48 2 54992764 55001431

Neighbor

gene id symbol gene type direction distance location
LOC110537791 LOC106567438 coding upstream 104130 54879673 ~ 54888634 (+)
ppp2r2bb LOC106567445 coding upstream 532162 54359273 ~ 54460602 (+)
LOC110538908 LOC106603872 coding upstream 711807 54253719 ~ 54283905 (+)
LOC100301661 LOC106567454 coding upstream 1187856 53801662 ~ 53804908 (+)
LOC110537776 LOC106567605 coding upstream 1300134 53690304 ~ 53692630 (+)
LOC100136153 LOC100136153 coding downstream 45729 55047160 ~ 55052488 (+)
LOC110537795 ablim3 coding downstream 63690 55065121 ~ 55209632 (+)
LOC110537794 afap1l1 coding downstream 208299 55209730 ~ 55247859 (+)
LOC110537796 LOC106567431 coding downstream 256003 55257434 ~ 55270161 (+)
LOC110537797 nola2 coding downstream 280300 55281731 ~ 55285435 (+)
G1088883 NA non-coding upstream 73768 54890174 ~ 54918996 (+)
G1088896 NA non-coding upstream 103194 54867931 ~ 54889570 (+)
G1088877 NA non-coding upstream 151126 54838201 ~ 54841638 (+)
G1088217 NA non-coding upstream 309809 54681981 ~ 54682955 (+)
G1088152 NA non-coding upstream 450130 54517301 ~ 54542634 (+)
G1089011 NA non-coding downstream 23377 55024808 ~ 55025073 (+)
G1089013 NA non-coding downstream 26233 55027664 ~ 55027888 (+)
G1089056 NA non-coding downstream 112763 55114194 ~ 55114513 (+)
G1088894 NA non-coding downstream 188319 55189750 ~ 55205645 (+)
G1088887 NA non-coding downstream 192104 55193535 ~ 55196940 (+)
G1087914 NA other upstream 843802 54109690 ~ 54148962 (+)
G1086237 LOC106567502 other upstream 2335269 52649604 ~ 52657495 (+)
G1082266 NA other upstream 5311960 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 5692417 49262142 ~ 49300347 (+)
G1091217 NA other downstream 1724176 56725607 ~ 56726003 (+)
G1091235 NA other downstream 1750987 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 2114394 57112902 ~ 57118165 (+)
LOC110537841 mtmr4 other downstream 2898040 57893341 ~ 58071571 (+)
LOC118937686 NA other downstream 3214724 58216142 ~ 58222215 (+)

Expression


Co-expression Network