Gene
RNA
| Item | Value |
|---|---|
| gene id | G1091475 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 57145899 ~ 57146125 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1241436 | True | 227 | lncRNA | 0.38 | 1 | 57145899 | 57146125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537832 | LOC106567406 | coding | upstream | 14297 | 57126747 ~ 57131602 (+) |
| LOC110537831 | dhx33 | coding | upstream | 27734 | 57112902 ~ 57118165 (+) |
| camkk1a | LOC106567408 | coding | upstream | 112197 | 56913023 ~ 57033702 (+) |
| LOC110537826 | LOC106567410 | coding | upstream | 276789 | 56792616 ~ 56869110 (+) |
| zzef1 | zzef1 | coding | upstream | 431617 | 56663069 ~ 56719231 (+) |
| LOC110537833 | LOC106567405 | coding | downstream | 390 | 57146515 ~ 57185366 (+) |
| LOC110537834 | srrm3 | coding | downstream | 44850 | 57190975 ~ 57346018 (+) |
| hspb1 | hspb1 | coding | downstream | 204817 | 57350942 ~ 57357274 (+) |
| LOC110537838 | LOC106567401 | coding | downstream | 290207 | 57436332 ~ 57618352 (+) |
| LOC118937890 | NA | coding | downstream | 512380 | 57658505 ~ 57661561 (+) |
| G1091474 | NA | non-coding | upstream | 1884 | 57143721 ~ 57144015 (+) |
| G1091473 | NA | non-coding | upstream | 2832 | 57142784 ~ 57143067 (+) |
| G1091472 | NA | non-coding | upstream | 3264 | 57142384 ~ 57142635 (+) |
| G1091470 | NA | non-coding | upstream | 4188 | 57141509 ~ 57141711 (+) |
| G1091469 | NA | non-coding | upstream | 4846 | 57140819 ~ 57141053 (+) |
| G1091608 | NA | non-coding | downstream | 215932 | 57362057 ~ 57362272 (+) |
| G1091502 | LOC100136198 | non-coding | downstream | 216338 | 57362463 ~ 57367549 (+) |
| G1091764 | NA | non-coding | downstream | 493596 | 57639721 ~ 57640141 (+) |
| G1091769 | NA | non-coding | downstream | 502434 | 57648559 ~ 57648890 (+) |
| G1091771 | NA | non-coding | downstream | 504395 | 57650520 ~ 57651064 (+) |
| G1091235 | NA | other | upstream | 392952 | 56752418 ~ 56752947 (+) |
| G1091217 | NA | other | upstream | 419896 | 56725607 ~ 56726003 (+) |
| LOC110538908 | LOC106603872 | other | upstream | 2865178 | 54253719 ~ 54283905 (+) |
| G1087914 | NA | other | upstream | 2996937 | 54109690 ~ 54148962 (+) |
| LOC110537841 | mtmr4 | other | downstream | 753346 | 57893341 ~ 58071571 (+) |
| LOC118937686 | NA | other | downstream | 1070030 | 58216142 ~ 58222215 (+) |
| G1093909 | NA | other | downstream | 2395433 | 59541558 ~ 59542603 (+) |
| G1094218 | LOC100380853 | other | downstream | 2884878 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 3239539 | 60385664 ~ 60385973 (+) |
