Gene
RNA
| Item | Value |
|---|---|
| gene id | G1092111 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 58339139 ~ 58339358 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1242125 | True | 220 | lncRNA | 0.49 | 1 | 58339139 | 58339358 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537848 | sp30l | coding | upstream | 52511 | 58274018 ~ 58286628 (+) |
| LOC110537846 | ggnbp2 | coding | upstream | 66353 | 58225787 ~ 58272786 (+) |
| LOC118937686 | NA | coding | upstream | 116924 | 58216142 ~ 58222215 (+) |
| LOC110537844 | LOC106567395 | coding | upstream | 154690 | 58159958 ~ 58184449 (+) |
| ca4a | NA | coding | upstream | 237603 | 58076921 ~ 58101536 (+) |
| LOC110539153 | LOC106604490 | coding | downstream | 188932 | 58528290 ~ 58530219 (+) |
| LOC110538918 | nkx3-2 | coding | downstream | 205788 | 58545146 ~ 58546597 (+) |
| rab28 | LOC106600633 | coding | downstream | 236243 | 58575601 ~ 58625910 (+) |
| LOC110538919 | atp8a1 | coding | downstream | 351759 | 58691117 ~ 58827450 (+) |
| LOC110538920 | NA | coding | downstream | 511378 | 58850736 ~ 58873451 (+) |
| G1092107 | NA | non-coding | upstream | 26639 | 58312174 ~ 58312500 (+) |
| G1092105 | NA | non-coding | upstream | 43742 | 58295186 ~ 58295397 (+) |
| G1092104 | NA | non-coding | upstream | 44499 | 58294172 ~ 58294640 (+) |
| G1092102 | NA | non-coding | upstream | 46188 | 58292728 ~ 58292951 (+) |
| G1092080 | NA | non-coding | upstream | 114533 | 58224406 ~ 58224606 (+) |
| G1093198 | NA | non-coding | downstream | 11281 | 58350639 ~ 58350874 (+) |
| G1093199 | NA | non-coding | downstream | 11517 | 58350875 ~ 58351080 (+) |
| G1093214 | NA | non-coding | downstream | 22579 | 58361937 ~ 58362238 (+) |
| G1093215 | NA | non-coding | downstream | 23053 | 58362411 ~ 58362673 (+) |
| G1093228 | NA | non-coding | downstream | 37201 | 58376559 ~ 58376775 (+) |
| LOC110537841 | mtmr4 | other | upstream | 424307 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 1221212 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 1586192 | 56752418 ~ 56752947 (+) |
| G1091217 | NA | other | upstream | 1613136 | 56725607 ~ 56726003 (+) |
| G1093909 | NA | other | downstream | 1202200 | 59541558 ~ 59542603 (+) |
| G1094218 | LOC100380853 | other | downstream | 1691645 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 2046306 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 2357329 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 2477133 | 60816491 ~ 60818897 (+) |
