G1093215


Basic Information

Item Value
gene id G1093215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 58362411 ~ 58362673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1243292
gagctcagtgaggttggatggagagcatttgtgaatagcagttttcagttctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggaatattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1243292 True 263 lncRNA 0.41 1 58362411 58362673

Neighbor

gene id symbol gene type direction distance location
LOC110537848 sp30l coding upstream 75783 58274018 ~ 58286628 (+)
LOC110537846 ggnbp2 coding upstream 89625 58225787 ~ 58272786 (+)
LOC118937686 NA coding upstream 140196 58216142 ~ 58222215 (+)
LOC110537844 LOC106567395 coding upstream 177962 58159958 ~ 58184449 (+)
ca4a NA coding upstream 260875 58076921 ~ 58101536 (+)
LOC110539153 LOC106604490 coding downstream 165617 58528290 ~ 58530219 (+)
LOC110538918 nkx3-2 coding downstream 182473 58545146 ~ 58546597 (+)
rab28 LOC106600633 coding downstream 212928 58575601 ~ 58625910 (+)
LOC110538919 atp8a1 coding downstream 328444 58691117 ~ 58827450 (+)
LOC110538920 NA coding downstream 488063 58850736 ~ 58873451 (+)
G1093214 NA non-coding upstream 173 58361937 ~ 58362238 (+)
G1093199 NA non-coding upstream 11331 58350875 ~ 58351080 (+)
G1093198 NA non-coding upstream 11537 58350639 ~ 58350874 (+)
G1092111 NA non-coding upstream 23053 58339139 ~ 58339358 (+)
G1092107 NA non-coding upstream 49911 58312174 ~ 58312500 (+)
G1093228 NA non-coding downstream 13886 58376559 ~ 58376775 (+)
G1093233 NA non-coding downstream 22050 58384723 ~ 58384927 (+)
G1093243 NA non-coding downstream 39793 58402466 ~ 58415184 (+)
G1093244 NA non-coding downstream 40623 58403296 ~ 58410859 (+)
G1093248 NA non-coding downstream 53114 58415787 ~ 58421231 (+)
LOC110537841 mtmr4 other upstream 447579 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 1244484 57112902 ~ 57118165 (+)
G1091235 NA other upstream 1609464 56752418 ~ 56752947 (+)
G1091217 NA other upstream 1636408 56725607 ~ 56726003 (+)
G1093909 NA other downstream 1178885 59541558 ~ 59542603 (+)
G1094218 LOC100380853 other downstream 1668330 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 2022991 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 2334014 60696612 ~ 60777061 (+)
G1095209 NA other downstream 2453818 60816491 ~ 60818897 (+)

Expression


Co-expression Network