XLOC_002981 (taar20f)


Basic Information

Item Value
gene id XLOC_002981
gene name taar20f
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40351198 ~ 40352250 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005494
ATGAAAGGACAGAAaggagagcagaacaaactcctaACAGGAGGAGACTCACTCATGGCCTATGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTGCCATAAACTCATCATGTGTCAAGGAGAGAAGCGCAAGTCATGGATATATCatcatatatgtgtttgtgtcattgctgtcagcatggactgtgtttctgaacctgctggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATTATTCTCTCTCTGGCTGTAAATGATCTGTTTATTGGACTCATCATACCTATAGAGGCTATCAGACAGATTGAGACTTGCTGGTATTTTGGAGACACTTTCTGtggactttatttattatttgtgtcaTTACTTCTGGCAGCATCGCTTGGTAATTTAGTTATAATCGCTGTTGATCGTTATGTAGCTGTGTGTCACCCTCTACTGTACCCACAGAAAATAACAATCACTAACATGTTAAAGAGTATCTGTCTGAGCTGGGTTTGCTTTTCAGCTTACTGCATTACCTTTATAATTAATAATGGAAGTTTTGACACTTCACACAGAACAGATGTGTGTTATGGACAGTGTTTAATGATAATAAGTTTTAGTTGCTTAATCATTGATCTGTTCATGTCTTTTATTTTTCCTTGTTTGCTGATCATCACTTTATATTTGAGGATTTTCTATGTGGTTCATCAGCAAGTGAAGGTTATAAACTCTCTGATGAAGGCTGGTAAATGTGTAACGGAGGGTTCAGTGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGTCAGTTTTTCTGCTTTGCTGGATTCCTTATTACATCTGTTCTCTCACTGTCAACTCTTACACagctataaatgttttaatatttgggGTACATGCTAGCTCCGGTCTGAATCCTCtggtttatgctttattttacccCTGGTTTAAAAAGACAGCTAAACTCATTTTAACTCTAAAAATATTTCAGCCGGCATCTTCTCTgatcaatatttttttacaagattAA

Function

symbol description
taar20f Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116643

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005494 True 1053 mRNA 0.38 1 40351198 40352250

Neighbor

gene id symbol gene type direction distance location
XLOC_002980 taar20h coding downstream 3066 40347080 ~ 40348132 (-)
XLOC_002978 smtlb coding downstream 1029831 39314578 ~ 39321367 (-)
XLOC_002977 cry5 coding downstream 1067315 39264802 ~ 39283883 (-)
XLOC_002976 b3gat1b coding downstream 1152256 39178450 ~ 39198942 (-)
XLOC_002975 slc37a4b coding downstream 1196420 39133410 ~ 39154778 (-)
XLOC_002982 taar20g coding upstream 7327 40359577 ~ 40360635 (-)
XLOC_002983 AL953903.2 coding upstream 22760 40375010 ~ 40375996 (-)
XLOC_002984 taar20c coding upstream 26511 40378761 ~ 40380136 (-)
XLOC_002985 AL953903.1 coding upstream 31532 40383782 ~ 40384432 (-)
XLOC_002986 taar20c1 coding upstream 34960 40387210 ~ 40388265 (-)
XLOC_002973 NA non-coding downstream 1261110 39087325 ~ 39090088 (-)
XLOC_002970 NA non-coding downstream 1686964 38663993 ~ 38664234 (-)
XLOC_002969 NA non-coding downstream 1824488 38511908 ~ 38526710 (-)
XLOC_002967 NA non-coding downstream 1853126 38412930 ~ 38498072 (-)
XLOC_002989 AL953903.3 non-coding upstream 51744 40403994 ~ 40404331 (-)
XLOC_002993 BX530037.4 non-coding upstream 66557 40418807 ~ 40419059 (-)
XLOC_003000 BX530037.2 non-coding upstream 116122 40468372 ~ 40469394 (-)

Expression


Co-expression Network