G1111926


Basic Information

Item Value
gene id G1111926
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75624874 ~ 75625085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264179
aggtcctgagcgctctggagcaagttttcatcaaggatctctctgtactttgctctgttcattttttccctcgatcctgaccagtctctcagtccctgctgctgaaaaacatccccacagcatgatgctgccaccaccatgcttcaacgtagggatggtgccaggtttcctccagacgtgacgcctggtattcaggccaaagagttcaatct

Function

NR:

description
Transposable element Tc1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264179 True 212 lncRNA 0.51 1 75624874 75625085

Neighbor

gene id symbol gene type direction distance location
LOC110538372 LOC106601241 coding upstream 921 75619338 ~ 75623953 (+)
LOC110538373 LOC106601242 coding upstream 16137 75593751 ~ 75608737 (+)
LOC110538377 f10a1 coding upstream 107094 75510999 ~ 75517780 (+)
LOC110538378 LOC106601246 coding upstream 161394 75443988 ~ 75463480 (+)
LOC110538383 LOC106601250 coding upstream 345332 75236926 ~ 75279542 (+)
LOC110538366 LOC106607160 coding downstream 13169 75638254 ~ 75649590 (+)
LOC110538368 LOC106601238 coding downstream 25834 75650919 ~ 75659715 (+)
LOC110538369 csdc2 coding downstream 34880 75659965 ~ 75664321 (+)
LOC110538365 LOC106601233 coding downstream 55423 75680508 ~ 75698504 (+)
LOC110538363 LOC106601232 coding downstream 103037 75728122 ~ 75735536 (+)
G1111922 NA non-coding upstream 11557 75612999 ~ 75613317 (+)
G1111921 NA non-coding upstream 11999 75612599 ~ 75612875 (+)
G1111914 NA non-coding upstream 35220 75589431 ~ 75589654 (+)
G1111913 NA non-coding upstream 35874 75588786 ~ 75589000 (+)
G1111928 NA non-coding downstream 1498 75626583 ~ 75627163 (+)
G1111887 LOC106601240 non-coding downstream 6233 75631318 ~ 75636032 (+)
G1111930 NA non-coding downstream 11494 75636579 ~ 75637927 (+)
G1111932 NA non-coding downstream 54412 75679497 ~ 75679850 (+)
G1111938 NA non-coding downstream 85268 75710353 ~ 75710571 (+)
G1111805 LOC105030512 other upstream 201711 75418789 ~ 75423163 (+)
G1111126 LOC106578813 other upstream 576518 74960266 ~ 75048356 (+)
G1109786 NA other upstream 1778080 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1790268 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 2239007 73384755 ~ 73386199 (+)
G1111961 NA other downstream 120054 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 125785 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 159265 75774976 ~ 75790602 (+)
LOC110538356 LOC106607146 other downstream 223520 75838066 ~ 75853712 (+)
G1111968 LOC106601158 other downstream 270527 75895612 ~ 75895873 (+)

Expression


Co-expression Network