G1111938


Basic Information

Item Value
gene id G1111938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75710353 ~ 75710571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264191
agggagagtgaagaaATGTGTGAAAAAATGCATTGgaaactactgtactgtagaccatTATCAGATGGATAAACCAGGAcaagatttcaaatcaaatttatttgtcacatacacatggttagcagatgttaatgcaagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacgagtaatctaacctaacaattccaaaactac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264191 True 219 lncRNA 0.36 1 75710353 75710571

Neighbor

gene id symbol gene type direction distance location
LOC110538365 LOC106601233 coding upstream 11849 75680508 ~ 75698504 (+)
LOC110538369 csdc2 coding upstream 46032 75659965 ~ 75664321 (+)
LOC110538368 LOC106601238 coding upstream 50638 75650919 ~ 75659715 (+)
LOC110538366 LOC106607160 coding upstream 60763 75638254 ~ 75649590 (+)
LOC110538372 LOC106601241 coding upstream 86400 75619338 ~ 75623953 (+)
LOC110538363 LOC106601232 coding downstream 17551 75728122 ~ 75735536 (+)
LOC110538360 LOC104946491 coding downstream 64405 75774976 ~ 75790602 (+)
LOC110538359 LOC106601229 coding downstream 81684 75792255 ~ 75821063 (+)
LOC110538357 kc1e coding downstream 112917 75823488 ~ 75835962 (+)
LOC110538356 LOC106607146 coding downstream 127495 75838066 ~ 75853712 (+)
G1111932 NA non-coding upstream 30503 75679497 ~ 75679850 (+)
G1111930 NA non-coding upstream 72426 75636579 ~ 75637927 (+)
G1111887 LOC106601240 non-coding upstream 74321 75631318 ~ 75636032 (+)
G1111928 NA non-coding upstream 83190 75626583 ~ 75627163 (+)
G1111926 NA non-coding upstream 85268 75624874 ~ 75625085 (+)
G1111940 NA non-coding downstream 1127 75711698 ~ 75712027 (+)
G1111942 NA non-coding downstream 4060 75714631 ~ 75714832 (+)
G1111974 NA non-coding downstream 47793 75758364 ~ 75758649 (+)
G1111977 NA non-coding downstream 53468 75764039 ~ 75764239 (+)
G1111805 LOC105030512 other upstream 287190 75418789 ~ 75423163 (+)
G1111126 LOC106578813 other upstream 661997 74960266 ~ 75048356 (+)
G1109786 NA other upstream 1863559 73846255 ~ 73846794 (+)
G1109778 NA other upstream 1875747 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 2324486 73384755 ~ 73386199 (+)
G1111961 NA other downstream 34568 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 40299 75750870 ~ 75753593 (+)
G1111968 LOC106601158 other downstream 185041 75895612 ~ 75895873 (+)

Expression


Co-expression Network