G1111977


Basic Information

Item Value
gene id G1111977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75764039 ~ 75764239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264235
CTCATGCAGAGACACACATTGAAAAATTCAATCACACACACTGAGAGGCTGTGAGACTCTGAAATTCACCTCTGTGTTTTTACGAGCCAGGCTATATATAGCCCTGTGTGTCTCCGGGGTCAGATGATACACTGAACATGACTTGACAGATGATCCGGCACAGTATCGAGCCCTTAAGGTATCCTGCAATCCTTCCCCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264235 True 201 lncRNA 0.47 1 75764039 75764239

Neighbor

gene id symbol gene type direction distance location
LOC110538363 LOC106601232 coding upstream 28503 75728122 ~ 75735536 (+)
LOC110538365 LOC106601233 coding upstream 65535 75680508 ~ 75698504 (+)
LOC110538369 csdc2 coding upstream 99718 75659965 ~ 75664321 (+)
LOC110538368 LOC106601238 coding upstream 104324 75650919 ~ 75659715 (+)
LOC110538366 LOC106607160 coding upstream 114449 75638254 ~ 75649590 (+)
LOC110538360 LOC104946491 coding downstream 10737 75774976 ~ 75790602 (+)
LOC110538359 LOC106601229 coding downstream 28016 75792255 ~ 75821063 (+)
LOC110538357 kc1e coding downstream 59249 75823488 ~ 75835962 (+)
LOC110538356 LOC106607146 coding downstream 73827 75838066 ~ 75853712 (+)
LOC110538354 LOC106607143 coding downstream 115562 75879801 ~ 75887011 (+)
G1111974 NA non-coding upstream 5390 75758364 ~ 75758649 (+)
G1111942 NA non-coding upstream 49207 75714631 ~ 75714832 (+)
G1111940 NA non-coding upstream 52012 75711698 ~ 75712027 (+)
G1111938 NA non-coding upstream 53468 75710353 ~ 75710571 (+)
G1111932 NA non-coding upstream 84189 75679497 ~ 75679850 (+)
G1111999 NA non-coding downstream 57217 75821456 ~ 75821759 (+)
G1112003 NA non-coding downstream 71939 75836178 ~ 75836555 (+)
G1112002 NA non-coding downstream 72396 75836635 ~ 75837450 (+)
G1111970 LOC106601177 other upstream 10446 75750870 ~ 75753593 (+)
G1111961 NA other upstream 18419 75745139 ~ 75745620 (+)
G1111805 LOC105030512 other upstream 340876 75418789 ~ 75423163 (+)
G1111126 LOC106578813 other upstream 715683 74960266 ~ 75048356 (+)
G1109786 NA other upstream 1917245 73846255 ~ 73846794 (+)
G1111968 LOC106601158 other downstream 131373 75895612 ~ 75895873 (+)
G1112079 NA other downstream 523359 76287598 ~ 76288502 (+)
G1112082 NA other downstream 535821 76300060 ~ 76300527 (+)

Expression


Co-expression Network