G1112003


Basic Information

Item Value
gene id G1112003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75836178 ~ 75836555 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264271
CTGAATTCCCCCCCCCaaaattccactgcatttcagccctgccacaaaaggaccagctgacatgtcagtgattctctcattaacacaggtgtgattgttgacgaggacaaggctggagatcacacTGTCACGCTgtttgagttcaaataacagactggaagcttcgaAAGGAGGATGGTGCTTGGTATCATTGTTCTTCcttggttacctgcaaggaaacacctgccatcattgctttgcacaaaaagggcttcacaggcaaggatattgctgccagtaagattgcacctaaatcaaccatttatcggatcatcaagaacttcaatgaGAGCGGTTcagttgttgtgaagaaggcttcagggcgcccaagaaagtcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264271 True 378 lncRNA 0.47 1 75836178 75836555

Neighbor

gene id symbol gene type direction distance location
LOC110538357 kc1e coding upstream 216 75823488 ~ 75835962 (+)
LOC110538359 LOC106601229 coding upstream 15115 75792255 ~ 75821063 (+)
LOC110538360 LOC104946491 coding upstream 45576 75774976 ~ 75790602 (+)
LOC110538363 LOC106601232 coding upstream 100642 75728122 ~ 75735536 (+)
LOC110538365 LOC106601233 coding upstream 137674 75680508 ~ 75698504 (+)
LOC110538356 LOC106607146 coding downstream 1511 75838066 ~ 75853712 (+)
LOC110538354 LOC106607143 coding downstream 43246 75879801 ~ 75887011 (+)
LOC110538352 LOC106601222 coding downstream 51051 75887606 ~ 75890269 (+)
LOC110538350 NA coding downstream 67307 75903862 ~ 75941562 (+)
LOC110538348 LOC106607138 coding downstream 117684 75954239 ~ 75957620 (+)
G1111999 NA non-coding upstream 14419 75821456 ~ 75821759 (+)
G1111977 NA non-coding upstream 71939 75764039 ~ 75764239 (+)
G1111974 NA non-coding upstream 77529 75758364 ~ 75758649 (+)
G1112002 NA non-coding downstream 80 75836635 ~ 75837450 (+)
G1112013 NA non-coding downstream 28569 75865124 ~ 75865539 (+)
G1112014 NA non-coding downstream 29275 75865830 ~ 75866521 (+)
G1112017 LOC106607145 non-coding downstream 34785 75871340 ~ 75873454 (+)
G1111970 LOC106601177 other upstream 82585 75750870 ~ 75753593 (+)
G1111961 NA other upstream 90558 75745139 ~ 75745620 (+)
G1111805 LOC105030512 other upstream 413015 75418789 ~ 75423163 (+)
G1111126 LOC106578813 other upstream 787822 74960266 ~ 75048356 (+)
G1111968 LOC106601158 other downstream 59057 75895612 ~ 75895873 (+)
G1112079 NA other downstream 451043 76287598 ~ 76288502 (+)
G1112082 NA other downstream 463505 76300060 ~ 76300527 (+)
LOC100136171 LOC100136171 other downstream 628229 76464742 ~ 76470326 (+)

Expression


Co-expression Network