G1111974


Basic Information

Item Value
gene id G1111974
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 75758364 ~ 75758649 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1264232
GATACAGCCTCGTCAGGAATGCCCAAGAATCGACAAAGCCTTGATGTGCCAACAAATAGTTTCCAAATTCCAAAGTGGTTAGTGATTGGGCTAATCTTGTAAAACTCCTTGAGCCCTGGTGACCTGGGCTGTTGGCTGTTTCTCAAAACATCAGGCGATCagcaggaaggcaggcagctCTGGAGTGTCTGGGGGTCAACGTGCTACATTTCATGTCTGTCCCCAAAACACAAAACCACATACCACTGGGCTGAAGTTAGAAGGCAGAAAGAAGAGGGGGTGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1264232 True 286 lncRNA 0.49 1 75758364 75758649

Neighbor

gene id symbol gene type direction distance location
LOC110538363 LOC106601232 coding upstream 22828 75728122 ~ 75735536 (+)
LOC110538365 LOC106601233 coding upstream 59860 75680508 ~ 75698504 (+)
LOC110538369 csdc2 coding upstream 94043 75659965 ~ 75664321 (+)
LOC110538368 LOC106601238 coding upstream 98649 75650919 ~ 75659715 (+)
LOC110538366 LOC106607160 coding upstream 108774 75638254 ~ 75649590 (+)
LOC110538360 LOC104946491 coding downstream 16327 75774976 ~ 75790602 (+)
LOC110538359 LOC106601229 coding downstream 33606 75792255 ~ 75821063 (+)
LOC110538357 kc1e coding downstream 64839 75823488 ~ 75835962 (+)
LOC110538356 LOC106607146 coding downstream 79417 75838066 ~ 75853712 (+)
LOC110538354 LOC106607143 coding downstream 121152 75879801 ~ 75887011 (+)
G1111942 NA non-coding upstream 43532 75714631 ~ 75714832 (+)
G1111940 NA non-coding upstream 46337 75711698 ~ 75712027 (+)
G1111938 NA non-coding upstream 47793 75710353 ~ 75710571 (+)
G1111932 NA non-coding upstream 78514 75679497 ~ 75679850 (+)
G1111930 NA non-coding upstream 120437 75636579 ~ 75637927 (+)
G1111977 NA non-coding downstream 5390 75764039 ~ 75764239 (+)
G1111999 NA non-coding downstream 62807 75821456 ~ 75821759 (+)
G1112003 NA non-coding downstream 77529 75836178 ~ 75836555 (+)
G1111970 LOC106601177 other upstream 4771 75750870 ~ 75753593 (+)
G1111961 NA other upstream 12744 75745139 ~ 75745620 (+)
G1111805 LOC105030512 other upstream 335201 75418789 ~ 75423163 (+)
G1111126 LOC106578813 other upstream 710008 74960266 ~ 75048356 (+)
G1109786 NA other upstream 1911570 73846255 ~ 73846794 (+)
G1111968 LOC106601158 other downstream 136963 75895612 ~ 75895873 (+)
G1112079 NA other downstream 528949 76287598 ~ 76288502 (+)
G1112082 NA other downstream 541411 76300060 ~ 76300527 (+)

Expression


Co-expression Network