XLOC_029919 (CR933528.1)


Basic Information

Item Value
gene id XLOC_029919
gene name CR933528.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 13243446 ~ 13249866 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058612
ATGCGTCATATATCTATTCTCGGATTTCTGAGTGTTTTTCTGCTGGTCCTGGACCCAGTTCAGAGCAATCCGATCATGGCTCAGTGTGTGGAGCACACATACTGCTCGTCCACACTGAAAGAGTACCACGAACAGCTCATCAACCTGCCCAGCCGGATCAATGAGCGCAGCATCGCTGGATGGAGCTACACGGATAACATCGACTTGGAACGTGTGCCACAGAGAATCTCTGAAGCAAACTGCCTAAACAGTCATTACTGTAAGGGGTACGACAGCGACTTCAGTCTGGAGAGCGTCCCGATCTCAATCAAAATGCCATTTCTCCGAAAAAACCCAAGATGCCCGACCTACGCACTGGAATTCGAGGACGTCAACATCGCCTGTATATGTGCAATATCTAGACAGAATTAA
>TCONS_00058613
caacaaaaacctcaagaattgtgttgttttagctcattatcaataagtagcttaaacaagcagcaaacatatatatatatatttttgagtaaatgacaaattaaagtgtttttccaATGCAGCTCCCAGTCAATTATAATACCGATGTGACTATTGTTTATGTGCATATTGCATTAtaatatattgtgtagccctatagttttaataatttcagATGTTGTTTTGTGGCCTGCTTGTCCTCTAACTCAGATTCTCGGATTTCTGAGTGTTTTTCTGCTGGTCCTGGACCCAGTTCAGAGCAATCCGATCATGGCTCAGTGTGTGGAGCACACATACTGCTCGTCCACACTGAAAGAGTACCACGAACAGCTCATCAACCTGCCCAGCCGGATCAATGAGCGCAGCATCGCTGGATGGAGCTACACGGATAACATCGACTTGGAACGTGTGCCACAGAGAATCTCTGAAGCAAACTGCCTAAACAGTCATTACTGTAAGGGGTACGACAGCGACTTCAGTCTGGAGAGCGTCCCGATCTCAATCAAAATGCCATTTCTCCGAAAAAACCCAAGATGCCCGACCTACGCACTGGAATTCGAGGACGTCAACATCGCCTGTATATGTGCAATATCTAGACAGAATTAAATCTGGCTCTGAAAACTCATGCACTAGGTTAATCTCAACTACAAGGAAGCCCGCTGACTAATCATGCTTAATATATTCTATTACTACAACACAACAAATATATACTGCAATCTAGATGTCTTAAGCTGCTGAATGCttgtaaatgtgaataaataaactGGTTTTATAACAAAACTTTGTTTTCCACTCATTCAGGGAACAAATGCACTTTTAAGATTGTTGTTTTTCTATAGAAATATTCGACATGCTAAAACCAAAAATGCTTGATCCCTGTGTACTTTTTATCctccttgttttttttaaatccaacaCACCAATTTAGTTAGCAAAAATATTTaatgcaagacactgcaggtaaaaaaacacttttttaaaaacattaccagggttcaacgctaaggattttttcaacTGGCCCAATTGGGCcagcggttcagatttttacttgccctgccaatattttcactggccccaccaaaaaagaaaagttaagttaatagctatttcttagccacatgtttTTAATATcgtgtcaaaaatgtgtttgtatctagaatttttatattgttaaaatgttaataaatgtataatgagcataTCTTCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111436

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058612 False 411 mRNA 0.49 3 13243446 13249262
TCONS_00058613 True 1249 mRNA 0.37 2 13245589 13249866

Neighbor

gene id symbol gene type direction distance location
XLOC_029918 NA coding upstream 144990 13096467 ~ 13098456 (+)
XLOC_029917 NA coding upstream 244405 12992736 ~ 12999041 (+)
XLOC_029915 ppil2 coding upstream 263460 12908781 ~ 12979986 (+)
XLOC_029916 BX470167.1 coding upstream 315892 12927438 ~ 12927554 (+)
XLOC_029914 gal3st1a coding upstream 336904 12888260 ~ 12906542 (+)
XLOC_029920 dre-mir-130c-2 coding downstream 38962 13288828 ~ 13288906 (+)
XLOC_029921 dre-mir-301b coding downstream 39487 13289353 ~ 13289433 (+)
XLOC_029922 NA coding downstream 41143 13291009 ~ 13292474 (+)
XLOC_029923 dre-mir-454b coding downstream 46441 13296307 ~ 13296422 (+)
XLOC_029924 dre-mir-130b coding downstream 49465 13299331 ~ 13299414 (+)
XLOC_029911 dre-mir-22b non-coding upstream 632563 12610802 ~ 12610883 (+)
XLOC_029907 NA non-coding upstream 1217492 12025519 ~ 12025954 (+)

Expression


Co-expression Network