XLOC_029920 (dre-mir-130c-2)


Basic Information

Item Value
gene id XLOC_029920
gene name dre-mir-130c-2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 13288828 ~ 13288906 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058614
TTGTTGACCAGGGCCCTTTTTCTGTTGTACTACTGTGCAGTCAGATGAGCAGTGCAATATTAAAAGGGCATTGGCTGAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083224

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058614 True 79 miRNA 0.46 1 13288828 13288906

Neighbor

gene id symbol gene type direction distance location
XLOC_029919 CR933528.1 coding upstream 38962 13243446 ~ 13249866 (+)
XLOC_029918 NA coding upstream 190372 13096467 ~ 13098456 (+)
XLOC_029917 NA coding upstream 289787 12992736 ~ 12999041 (+)
XLOC_029915 ppil2 coding upstream 308842 12908781 ~ 12979986 (+)
XLOC_029916 BX470167.1 coding upstream 361274 12927438 ~ 12927554 (+)
XLOC_029921 dre-mir-301b coding downstream 447 13289353 ~ 13289433 (+)
XLOC_029922 NA coding downstream 2103 13291009 ~ 13292474 (+)
XLOC_029923 dre-mir-454b coding downstream 7401 13296307 ~ 13296422 (+)
XLOC_029924 dre-mir-130b coding downstream 10425 13299331 ~ 13299414 (+)
XLOC_029925 ydjc coding downstream 19233 13308139 ~ 13335624 (+)
XLOC_029911 dre-mir-22b non-coding upstream 677945 12610802 ~ 12610883 (+)
XLOC_029907 NA non-coding upstream 1262874 12025519 ~ 12025954 (+)
XLOC_029932 NA non-coding downstream 314323 13603229 ~ 13616296 (+)

Expression


Co-expression Network