XLOC_030446 (AL935198.1)


Basic Information

Item Value
gene id XLOC_030446
gene name AL935198.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 52055227 ~ 52057554 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059489
ATTACCGAGCCCCATTCAAGCACTGCAGCAGAGAGCGTTGTCATGGAAACGGAGCAACGACACGACACCTGACCGTCAACAGCACTTCTCTCATGCGGCAGTTTTCACtaatttcaggagtgaCAAAATTACCCCTACAACAGAAGAGAAGAGCCAATATGAAGGGAGCTAATCACTGAGCTGGAGGAAACACAGATTTTGGATCGTCCTCTACTCACTCTACCACTTTGTTTTTCCTTGCCAGACTTCATTCAAGGATAAGAAAGAAGCCTGCTACAAGAGAGACAGCGGAAGGAACCTCAAAGACATTTTTATTAGGATCTGCTAATCATGAGGGGGCAGACAAAAGAACctgcattttccttcagcttaatatcaggggtcgccacagcgtaaggAACTGGATAttactttggcatatgttttacacagccttccagctgcaacccagcactgtgaaacacccatacactctcgtatTCACAGACACTTCTACACTATgttcaaattcacctatagcacaagtgtttggactgtggtggaaacccacaccaaaacagggagaacatgcaaactccacacagaaatgccagcggacccagccgggactcataccagcaacctttttgctgtgaggtgacagtcttattaataacctccagatgttttagtttgattttgtaataataatgcacgtttacatttattgtaatatgttaatattaatttgcaatgtaatttatttttatgttatttataataacGTTAAATGTCATAAGaatgttataatttaatataatattataataaataattataataatgttaaaatataaataatactaattttttaatagtttatttttataatgagaaGTCTCAAAGTTTGTCTTTATTATAGAAAACTCATTG
>TCONS_00059490
GCAGAGAGCGTTGTCATGGAAACGGAGCAACGACACGACACCTGACCGTCAACAGCACTTCTCTCATGCGGCAGTTTTCACtaatttcaggagtgaCAAAATTACCCCTACAACAGAAGAGAAGAGCCAATATGAAGGGAGCTAATCACTGAGCTGGAGGAAACACAGATTTTGGATCGTCCTCTACTCACTCTACCACTTTGTTTTTCCTTGCCAGACTTCATTCAAGAAGCCTGCTACAAGAGAGACAGCGGAAGGAACCTCAAAGACATTTTTATTAGGATCTGCTAATCATGAGGGGGCAGACAAAAGAACctgcattttccttcagcttaatatcaggggtcgccacagcgtaaggAACTGGATAttactttggcatatgttttacacagc
>TCONS_00059491
ggagtgaCAAAATTACCCCTACAACAGAAGAGAAGAGCCAATATGAAGGGAGCTAATCACTGAGCTGGAGGAAACACAGATTTTGGATCGTCCTCTACTCACTCTACCACTTTGTTTTTCCTTGCCAGACTTCATTCAAGAAAGAAGCCTGCTACAAGAGAGACAGCGGAAGGAACCTCAAAGACATTTTTATTAGGATCTGCTAATCATGAGGGGGCAGACAAAAGAACctgcattttccttcagcttaatatcaggggtcgccacagcgtaaggAACTGGATAttactttggcatatgttttacacagccttccagctgcaacccagcactgtgaaacacccatacactctcgtatTCACAGACACTTCTACACTATgttcaaattcacctatagcacaagtgtttggactgt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092975

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059489 False 912 processed_transcript 0.37 4 52055227 52057554
TCONS_00059490 False 396 processed_transcript 0.45 4 52055254 52057075
TCONS_00059491 True 415 processed_transcript 0.44 3 52055730 52057179

Neighbor

gene id symbol gene type direction distance location
XLOC_030444 NA coding upstream 27496 52012883 ~ 52027731 (+)
XLOC_030443 thbs4a coding upstream 109673 51909740 ~ 51945554 (+)
XLOC_030442 cmya5 coding upstream 170452 51848756 ~ 51884775 (+)
XLOC_030441 tent2 coding upstream 207331 51833132 ~ 51847896 (+)
XLOC_030440 CT033828.1 coding upstream 244302 51810809 ~ 51810925 (+)
XLOC_030447 slc14a2 coding downstream 110432 52167986 ~ 52177850 (+)
XLOC_030448 FP016029.1 coding downstream 168130 52225684 ~ 52225805 (+)
XLOC_030449 BX957336.2 coding downstream 380838 52438392 ~ 52442492 (+)
XLOC_030450 ptar1 coding downstream 539296 52596850 ~ 52621954 (+)
XLOC_030451 apba1a coding downstream 568421 52625975 ~ 52733569 (+)
XLOC_030439 NA non-coding upstream 286345 51768257 ~ 51768882 (+)
XLOC_030438 NA non-coding upstream 386618 51665494 ~ 51668609 (+)
XLOC_030436 CR388055.2 non-coding upstream 499763 51555333 ~ 51555464 (+)
XLOC_030454 NA non-coding downstream 1130450 53188004 ~ 53191067 (+)
XLOC_030455 NA non-coding downstream 1134108 53191662 ~ 53192805 (+)
XLOC_030460 CR450749.2 non-coding downstream 2048456 54106010 ~ 54108514 (+)

Expression


Co-expression Network