XLOC_030440 (CT033828.1)


Basic Information

Item Value
gene id XLOC_030440
gene name CT033828.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 51810809 ~ 51810925 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059476
TTAAAtggccatatcaccctgcagcccaacaccggttacttactgaagctaagcataTCTGAGCCTGGTCCGTagctggatggaagaccacatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108024

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059476 True 117 rRNA 0.49 1 51810809 51810925

Neighbor

gene id symbol gene type direction distance location
XLOC_030439 NA coding upstream 41927 51768257 ~ 51768882 (+)
XLOC_030438 NA coding upstream 142200 51665494 ~ 51668609 (+)
XLOC_030437 ckmt2b coding upstream 201803 51594209 ~ 51609006 (+)
XLOC_030435 rasgrf2b coding upstream 229034 51443009 ~ 51581775 (+)
XLOC_030436 CR388055.2 coding upstream 255345 51555333 ~ 51555464 (+)
XLOC_030441 tent2 coding downstream 22207 51833132 ~ 51847896 (+)
XLOC_030442 cmya5 coding downstream 37831 51848756 ~ 51884775 (+)
XLOC_030443 thbs4a coding downstream 98815 51909740 ~ 51945554 (+)
XLOC_030444 NA coding downstream 201958 52012883 ~ 52027731 (+)
XLOC_030445 setbp1 coding downstream 228142 52039067 ~ 52132978 (+)
XLOC_030429 NA non-coding upstream 743581 51063548 ~ 51067228 (+)
XLOC_030424 NA non-coding upstream 993660 50815532 ~ 50817149 (+)
XLOC_030446 AL935198.1 non-coding downstream 244302 52055227 ~ 52057554 (+)
XLOC_030448 FP016029.1 non-coding downstream 414759 52225684 ~ 52225805 (+)
XLOC_030449 BX957336.2 non-coding downstream 627467 52438392 ~ 52442492 (+)
XLOC_030454 NA non-coding downstream 1377079 53188004 ~ 53191067 (+)

Expression


Co-expression Network