XLOC_030437 (ckmt2b)


Basic Information

Item Value
gene id XLOC_030437
gene name ckmt2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 51594209 ~ 51609006 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059471
AGATGAAATAGGATTGGCTGGAGAGATGAGCTTTTATTTTGAGCACAGGCCCGCTGTCGTCTCACTCTACAGGAACAGCCTGCTCTACCGGAGCCTGAGACCCCTTCAATTCTACAGGTGAGTGAGTGGTGACAACCGCAAGCATGTTCAGTCGAGTGTTATCCGGACGCAACTCTGCTGTGGTGGCGGCCAGCCTAGGTGCAGGTGCCCTGGTCTCCAGCTACATCATGACAGAGTCAGGAGTCTCTGCTGGAGAGAAGACAAAGCTTTACCCACCCAGCGCGGACTTCCCAGATCTGCGCAAACATAACAACTGCATGGCTTCTGCTTTGACCCCTGCTATTTATGGTCGTCTGAGAGACAAACTGACCCCCAATAACTGGAGTGTTGACCAGTGCATTCAGACCGGAGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTGGGGATGGTGGCTGGCGATGAGGAGAGCTATGAGGTGTTTGCTGATCTCTTTGACCCAGTCATTAAGGACAGGCACAATGGTTATGACCCTAAAACCATGAAGCACCCAACAGACCTGGACAGCTCCAAGATCACCAATGGGATGTTCGACGAGAAATACGTGCTGTCATCCCGTGTGCGCACAGGTCGCAGTATTCGAGGACTCAGTCTGCCACCTGCCTGCTCCCGTGCTGAACGCCGTGAAGTAGAGCGTGTGACTGTCCAGGCTCTTTCTGGACTGAAAGATGACCTGGCGGGCAAATACTACAGCCTGACAGAGATGACTGAACAAGAGCAGCAGCAGCTGATTGATGACCACTTCTTGTTTGACAAGCCCGTATCCCCCCTGTTGACTTGTGCAGGAATGGCGCGGGACTGGCCCGATGCCAGAGGCATCTG
>TCONS_00059472
TTTTATTTTGAGCACAGGCCCGCTGTCGTCTCACTCTACAGGAACAGCCTGCTCTACCGGAGCCTGAGACCCCTTCAATTCTACAGTTCAGGTGAGTGAGTGGTGACAACCGCAAGCATGTTCAGTCGAGTGTTATCCGGACGCAACTCTGCTGTGGTGGCGGCCAGCCTAGGTGCAGGTGCCCTGGTCTCCAGCTACATCATGACAGAGTCAGGAGTCTCTGCTGGAGAGAAGACAAAGCTTTACCCACCCAGCGCGGACTTCCCAGATCTGCGCAAACATAACAACTGCATGGCTTCTGCTTTGACCCCTGCTATTTATGGTCGTCTGAGAGACAAACTGACCCCCAATAACTGGAGTGTTGACCAGTGCATTCAGACCGGAGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTGGGGATGGTGGCTGGCGATGAGGAGAGCTATGAGGTGTTTGCTGATCTCTTTGACCCAGTCATTAAGGACAGGCACAATGGTTATGACCCTAAAACCATGAAGCACCCAACAGACCTGGACAGCTCCAAGATCACCAATGGGATGTTCGACGAGAAATACGTGCTGTCATCCCGTGTGCGCACAGGTCGCAGTATTCGAGGACTCAGTCTGCCACCTGCCTGCTCCCGTGCTGAACGCCGTGAAGTAGAGCGTGTGACTGTCCAGGCTCTTTCTGGACTGAAAGATGACCTGGCGGGCAAATACTACAGCCTGACAGAGATGACTGAACAAGAGCAGCAGCAGCTGATTGATGACCACTTCTTGTTTGACAAGCCCGTATCCCCCCTGTTGACTTGTGCAGGAATGGCGCGGGACTGGCCCGATGCCAGAGGCATCTGGCACAACaatgaaaaaacatttttgatctgGATCAACGAGGAGGATCACACCCGTGTTATTTCCATGGAAAAGGGTGGGAACATGCAGAGGGTGTTTGATAGGTTCTGCAGAGGACTCAAAGAGGTGGAAAGACTGATTGAGGAGAGAGGCTGGGAGTTTATGTGGAACGAACGTTTGGGATACATCCTGACCTGTCCTTCTAACCTCGGCACTGGGCTAAGAGCCGGAGTTCACGTCCGTCTGCCCATCCTAAGCAAGGACAAACGCTTCAATAAAATTTTGGACAATCTCAGGCTCCAGAAACGTGGCACAGGAGGTGTGGATACTGCGGCAGTGGGTGACACTTTCGACATCTCCAACCTTGACCGTCTAGGCAAATCTGAGGTTGAACTTGTTCAATGTGTGGTTGATGGCGTCAACTACCTGATCGACTGTGAAAAGAAGCTTGAGAAGGGCCAGGACATTACTGTCCCTTCACCAGTGTCCCAGTTCAAGAAATGATGACATCTTCCTGAATGGAGCAAGGCAGCTGAGATCTGTAACCTTCTCTACGGGTCTTAATATATGGAactcaactaaataaataa
>TCONS_00059473
CAGCCTGCTCTACCGGAGCCTGAGACCCCTTCAATTCTACAGTTCAGGTGAGTGAGTGGTGACAACCGCAAGCATGTTCAGTCGAGTGTTATCCGGACGCAACTCTGCTGTGGTGGCGGCCAGCCTAGGTGCAGGTGCCCTGGTCTCCAGCTACATCATGACAGAGTCAGGAGTCTCTGCTGGAGAGAAGACAAAGCTTTACCCACCCAGCGCGGACTTCCCAGATCTGCGCAAACATAACAACTGCATGGCTTCTGCTTTGACCCCTGCTATTTATGGTCGTCTGAGAGACAAACTGACCCCCAATAACTGGAGTGTTGACCAGTGCATTCAGACCGGAGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTGGGGATGGTGGCTGGCGATGAGGAGAGCTATGAGGTGTTTGCTGATCTCTTTGACCCAGTCATTAAGGACAGGCACAATGGTTATGACCCTAAAACCATGAAGCACCCAACAGACCTGGACAGCTCCAAGATCACCAATGGGATGTTCGACGAGAAATACGTGCTGTCATCCCGTGTGCGCACAGGTCGCAGTATTCGAGGACTCAGTCTGCCACCTGCCTGCTCCCGTGCTGAACGCCGTGAAGTAGAGCGTGTGACTGTCCAGGCTCTTTCTGGACTGAAAGATGACCTGGCGGGCAAATACTACAGCCTGACAGAGATGACTGAACAAGAGCAGCAGCAGCTGATTGATGAACACTTCCTCTTTGATAAACCCGTGTCTCCTCTCCTCACCGCATCTGGTATGGCT
>TCONS_00059474
TCTTAAGTTCAGGTGAGTGAGTGGTGACAACCGCAAGCATGTTCAGTCGAGTGTTATCCGGACGCAACTCTGCTGTGGTGGCGGCCAGCCTAGGTGCAGGTGCCCTGGTCTCCAGCTACATCATGACAGAGTCAGGAGTCTCTGCTGGAGAGAAGACAAAGCTTTACCCACCCAGCGCGGACTTCCCAGATCTGCGCAAACATAACAACTGCATGGCTTCTGCTTTGACCCCTGCTATTTATGGTCGTCTGAGAGACAAACTGACCCCCAATAACTGGAGTGTTGACCAGTGCATTCAGACCGGAGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTGGGGATGGTGGCTGGCGATGAGGAGAGCTATGAGGTGTTTGCTGATCTCTTTGACCCAGTCATTAAGGACAGGCACAATGGTTATGACCCTAAAACCATGAAGCACCCAACAGACCTGGACAGCTCCAAGATCACCAATGGGATGTTCGACGAGAAATACGTGCTGTCATCCCGTGTGCGCACAGGTCGCAGTATTCGAGGACTCAGTCTGCCACCTGCCTGCTCCCGTGCTGAACGCCGTGAAGTAGAGCGTGTGACTGTCCAGGCTCTTTCTGGACTGAAAGATGACCTGGCGGGCAAATACTACAGCCTGACAGAGATGACTGAACAAGAGCAGCAGCAGCTGATTGATGAACACTTCCTCTTTGATAAACCCGTGTCTCCTCTCCTCACCGCATCTGGTATGGCTAGAGATTGGCCAGATGCTCGTGGCATTTGGCACAACaatgaaaaaacatttttgatctgGATCAACGAGGAGGATCACACCCGTGTTATTTCCATGGAAAAGGGTGGGAACATGCAGAGGGTGTTTGATAGGTTCTGCAGAGGACTCAAAGAGGTGGAAAGACTGATTGAGGAGAGAGGCTGGGAGTTTATGTGGAACGAACGTTTGGGATACATCCTGACCTGTCCTTCTAACCTCGGCACTGGGCTAAGAGCCGGAGTTCACGTCCGTCTGCCCATCCTAAGCAAGGACAAACGCTTCAATAAAATTTTGGACAATCTCAGGCTCCAGAAACGTGGCACAGGAGGTGTGGATACTGCGGCAGTGGGTGACACTTTCGACATCTCCAACCTTGACCGTCTAGGCAAATCTGAGGTTGAACTTGTTCAATGTGTGGTTGATGGCGTCAACTACCTGATCGACTGTGAAAAGAAGCTTGAGAAGGGCCAGGACATTACTGTCCCTTCACCAGTGTCCCAGTTCAAGAAATGATGACATCTTCCTGAATGGAGCAAGGCAGCTGAGATCTGTAACCTTCTCTACGGGTCTTAATATATGGAactcaactaaataaataattcttatttAAA
>TCONS_00059475
TTCAGGTGAGTGAGTGGTGACAACCGCAAGCATGTTCAGTCGAGTGTTATCCGGACGCAACTCTGCTGTGGTGGCGGCCAGCCTAGGTGCAGGTGCCCTGGTCTCCAGCTACATCATGACAGAGTCAGGAGTCTCTGCTGGAGAGAAGACAAAGCTTTACCCACCCAGCGCGGACTTCCCAGATCTGCGCAAACATAACAACTGCATGGCTTCTGCTTTGACCCCTGCTATTTATGGTCGTCTGAGAGACAAACTGACCCCCAATAACTGGAGTGTTGACCAGTGCATTCAGACCGGAGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTGGGGATGGTGGCTGGCGATGAGGAGAGCTATGAGGTGTTTGCTGATCTCTTTGACCCAGTCATTAAGGACAGGCACAATGGTTATGACCCTAAAACCATGAAGCACCCAACAGACCTGGACAGCTCCAAGATCACCAATGGGATGTTCGACGAGAAATACGTGCTGTCATCCCGTGTGCGCACAGGTCGCAGTATTCGAGGACTCAGTCTGCCACCTGCCTGCTCCCGTGCTGAACGCCGTGAAGTAGAGCGTGTGACTGTCCAGGCTCTTTCTGGACTGAAAGATGACCTGGCGGGCAAATACTACAGCCTGACAGAGATGACTGAACAAGAGCAGCAGCAGCTGATTGATGACCACTTCTTGTTTGACAAGCCCGTATCCCCCCTGTTGACTTGTGCAGGAATGGCGCGGGACTGGCCCGATGCCAGAGGCATCTGGCACAACaatgaaaaaacatttttgatctgGATCAACGAGGAGGATCACACCCGTGTTATTTCCATGGAAAAGGGTGGGAACATGCAGAGGGTGTTTGATAGGTTCTGCAGAGGACTCAAAGAGGTGGAAAGACTGATTGAGGAGAGAGGCTGGGAGTTTATGTGGAACGAACGTTTGGGATACATCCTGACCTGTCCTTCTAACCTCGGCACTGGGCTAAGAGCCGGAGTTCACGTCCGTCTGCCCATCCTAAGCAAGGACAAACGCTTCAATAAAATTTTGGACAATCTCAGGCTCCAGAAACGTGGCACAGGAGGTGTGGATACTGCGGCAGTGGGTGACACTTTCGACATCTCCAACCTTGACCGTCTAGGCAAATCTGAGGTTGAACTTGTTCAATGTGTGGTTGATGGCGTCAACTACCTGATCGACTGTGAAAAGAAGCTTGAGAAGGGCCAGGACATTACTGTCCCTTCACCAGTGTCCCAGTTCAAGAAATGATGACATCTTCCTGAATGGAGCAAGGCAGCTGAGATCTGTAACCTTCTCTACGGGTCTTAATATATGGAactcaactaaataaataattcttatttAAATCTAGTCTTGTGGAATCTTTCCCATTAACTGATACTATAGTTGCTGAAAGTGGGAGCCAGCCTGCAGATTTTGGATGGTAAGAGAAAAAGAAGGTTCACAGAAAAAGATGTAGAGATGGGCAATAGACACCTTTCACCGATTTTCACTCCTTTCACACATTTATATAGTTTCAGATTATGATCCACCAAGTCAGATAACATGAGACCTGTataataagattttttaaattttataatgttttgtgGC

Function

symbol description
ckmt2b Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in mitochondrion. Is expressed in musculature system; myotome; pectoral fin musculature; retina; and trunk musculature. Orthologous to human CKMT2 (creatine kinase, mitochondrial 2).

GO:

id name namespace
GO:0046314 phosphocreatine biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005739 mitochondrion cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function
GO:0004111 creatine kinase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1654 Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in mitochondrion. Is expressed in musculature system; myotome; pectoral fin musculature; retina; and trunk musculature. Orthologous to human CKMT2 (creatine kinase, mitochondrial 2).

Ensembl:

ensembl_id ENSDARG00000039929

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059471 False 883 mRNA 0.54 6 51594209 51604319
TCONS_00059472 False 1445 mRNA 0.51 10 51594240 51608747
TCONS_00059473 False 784 mRNA 0.53 6 51594284 51602505
TCONS_00059474 False 1378 mRNA 0.50 9 51597677 51608759
TCONS_00059475 True 1618 mRNA 0.48 9 51597684 51609006

Neighbor

gene id symbol gene type direction distance location
XLOC_030435 rasgrf2b coding upstream 12434 51443009 ~ 51581775 (+)
XLOC_030436 CR388055.2 coding upstream 38745 51555333 ~ 51555464 (+)
XLOC_030434 msh3 coding upstream 153668 51248784 ~ 51440541 (+)
XLOC_030433 ubac1 coding upstream 350284 51226846 ~ 51243925 (+)
XLOC_030432 pomt1 coding upstream 466178 51111343 ~ 51128031 (+)
XLOC_030438 NA coding downstream 56488 51665494 ~ 51668609 (+)
XLOC_030439 NA coding downstream 159251 51768257 ~ 51768882 (+)
XLOC_030440 CT033828.1 coding downstream 201803 51810809 ~ 51810925 (+)
XLOC_030441 tent2 coding downstream 224126 51833132 ~ 51847896 (+)
XLOC_030442 cmya5 coding downstream 239750 51848756 ~ 51884775 (+)
XLOC_030429 NA non-coding upstream 526981 51063548 ~ 51067228 (+)
XLOC_030424 NA non-coding upstream 777060 50815532 ~ 50817149 (+)
XLOC_030420 NA non-coding upstream 1815839 49753671 ~ 49778370 (+)
XLOC_030418 NA non-coding upstream 2188489 49383853 ~ 49405720 (+)
XLOC_030444 NA non-coding downstream 403877 52012883 ~ 52027731 (+)
XLOC_030446 AL935198.1 non-coding downstream 446221 52055227 ~ 52057554 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000080_00508732_00513791 CKMT2, CKMT2B coding CI01000080 null 508732 ~ 513895 (+)