Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_030564 |
| gene name | selenow1 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007116.7 |
| NCBI id | CM002889.2 |
| chromosome length | 72500376 |
| location | 61998641 ~ 62005081 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| selenow1 | Predicted to enable antioxidant activity. Predicted to be involved in response to selenium ion. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in several structures, including Kupffer's vesicle; basal plate midbrain region; hatching gland; nervous system; and periderm. Orthologous to human SELENOW (selenoprotein W). |
| id | name | namespace |
|---|---|---|
| GO:0010269 | response to selenium ion | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0016209 | antioxidant activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030410-5 | Predicted to enable antioxidant activity. Predicted to be involved in response to selenium ion. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in several structures, including Kupffer's vesicle; basal plate midbrain region; hatching gland; nervous system; and periderm. Orthologous to human SELENOW (selenoprotein W). |
| ensembl_id | ENSDARG00000035136 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00059665 | False | 722 | mRNA | 0.46 | 6 | 61998641 | 62005081 |
| TCONS_00059666 | True | 539 | lncRNA | 0.46 | 5 | 61998672 | 62004794 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_030563 | ehd2a | coding | upstream | 6218 | 61976511 ~ 61992423 (+) |
| XLOC_030562 | si:dkeyp-117b8.4 | coding | upstream | 47602 | 61941610 ~ 61951039 (+) |
| XLOC_030561 | rsph4a | coding | upstream | 67781 | 61919217 ~ 61930860 (+) |
| XLOC_030560 | sympk | coding | upstream | 105724 | 61862199 ~ 61892917 (+) |
| XLOC_030559 | CR759879.1 | coding | upstream | 139972 | 61839707 ~ 61858669 (+) |
| XLOC_030565 | akap10 | coding | downstream | 4684 | 62009765 ~ 62043299 (+) |
| XLOC_030566 | si:dkey-35m8.1 | coding | downstream | 47457 | 62052538 ~ 62289065 (+) |
| XLOC_030567 | BX511157.1 | coding | downstream | 80736 | 62085817 ~ 62085934 (+) |
| XLOC_030568 | pho | coding | downstream | 314136 | 62319217 ~ 62335694 (+) |
| XLOC_030569 | aspa | coding | downstream | 335718 | 62340799 ~ 62356975 (+) |
| XLOC_030555 | NA | non-coding | upstream | 367068 | 61601806 ~ 61631573 (+) |
| XLOC_030554 | NA | non-coding | upstream | 397404 | 61588608 ~ 61601237 (+) |
| XLOC_030552 | NA | non-coding | upstream | 417368 | 61579446 ~ 61581273 (+) |
| XLOC_030553 | NA | non-coding | upstream | 417873 | 61579953 ~ 61580768 (+) |
| XLOC_030545 | NA | non-coding | upstream | 644112 | 61349733 ~ 61354529 (+) |
| XLOC_030572 | CR394528.1 | non-coding | downstream | 637843 | 62642924 ~ 62712620 (+) |
| XLOC_030573 | NA | non-coding | downstream | 638125 | 62643206 ~ 62710728 (+) |
| XLOC_030574 | BX510960.1 | non-coding | downstream | 694667 | 62699748 ~ 62704404 (+) |
| XLOC_030577 | AL928675.1 | non-coding | downstream | 882047 | 62887128 ~ 62887243 (+) |
