XLOC_030554


Basic Information

Item Value
gene id XLOC_030554
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 61588608 ~ 61601237 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061830
GCGCTATTTATCGTCACAGTCCAAAACTCAAGGAGTACAAATGCAGGAGTACAGTATGATGAAAAAGCGAGCATACCTTGACAGCATGCAGTAAAGCGGGTTTGACAGCGGTCATTAAAGAGTCCTGCGCTAAAACCTCAAACACTGAGGGTCGATCTTCAGCCGGGGCAGCTGTGGTTAAATGAGCTCCTCGCTCCGCCATCACACCTGATGAGGAAAACTACTGCAAACAACAATAACGCCTTCCTACAGggttctggatcactcatgttTTCCAGTATTTATATATGAACTGATAGAGGAGGAGCTTCATGGAAAGAGGGGGAGCTTCATTACAGATGGAGGAGCTTTAATGAAAAAGGATGAGCTTCATGACTGGAGCAGATCTGCAAGGGAGGAAATGCTTCAGTTAAGTGATTATTGAAGATTTTGACACATTACTTCATCACCTCGGAAAGGACTGTCCTCAGACTGCATATAGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061830 True 482 lncRNA 0.45 3 61588608 61601237

Neighbor

gene id symbol gene type direction distance location
XLOC_030552 NA coding upstream 7335 61579446 ~ 61581273 (+)
XLOC_030553 NA coding upstream 7840 61579953 ~ 61580768 (+)
XLOC_030551 orai2 coding upstream 17161 61556172 ~ 61571447 (+)
XLOC_030550 bckdk coding upstream 34598 61508418 ~ 61554010 (+)
XLOC_030549 lrwd1 coding upstream 83734 61475346 ~ 61504874 (+)
XLOC_030555 NA coding downstream 569 61601806 ~ 61631573 (+)
XLOC_030556 ap2b1 coding downstream 55773 61657010 ~ 61724082 (+)
XLOC_030557 RASL10B coding downstream 137039 61738276 ~ 61755045 (+)
XLOC_030558 hnrnpul1l coding downstream 198392 61799629 ~ 61820009 (+)
XLOC_030559 CR759879.1 coding downstream 238470 61839707 ~ 61858669 (+)
XLOC_030545 NA non-coding upstream 234079 61349733 ~ 61354529 (+)
XLOC_030544 CR932980.2 non-coding upstream 328541 61259952 ~ 61260067 (+)
XLOC_030539 NA non-coding upstream 811085 60763937 ~ 60777523 (+)
XLOC_030567 BX511157.1 non-coding downstream 484580 62085817 ~ 62085934 (+)
XLOC_030572 CR394528.1 non-coding downstream 1041687 62642924 ~ 62712620 (+)
XLOC_030573 NA non-coding downstream 1041969 62643206 ~ 62710728 (+)
XLOC_030574 BX510960.1 non-coding downstream 1098511 62699748 ~ 62704404 (+)

Expression


Co-expression Network