XLOC_030787



Basic Information


Item Value
gene id XLOC_030787
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 4864870 ~ 4907610 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061924
CCTACCTGACACTTCCTGGCCGTGAGTGTTTCGCTTGTTTTGGCAGTGtgatatttgtgtatttctgcCATGTTTGTGTGCGTCTGTCGCGTGTGGATTTACATTTATGAACGTCTAACATCGCCCTGACGCTGTGGATTAATAAAAACACGCGCTGTACTGGATTATACACGCAGCCGAGTTCGTTTAATGGATGACTGGAGGCAGAAAAAGTGATTTGTTTTCCTCTGACTGATCCAGGATCATACAGCACTGAGATATACAGAAAGGTATGGATGATCTGTCATATATGGGGTCTGGCTGAGGGCCGCTGCTGCCCCGGCTACTGCACCCCATTGGCTGAATCACCAGCATGTACCGCAGAAACGGCCTATCGGATGGCACCAGCATTAGCTCCGCCTCCTCAGAGGGCAGTCAGAGCTCAGTGTCTGTGGACGGGCCGAGCGTCGGATGTGCCAAGAGTTATGATGCTGTCGTGTTCGATGTGCTCAAAGTGACGCCAGAGGAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061924 True 508 lncRNA 0.51 3 4864870 4907610

Neighbor


gene id symbol gene type direction distance location
XLOC_030786 CU915770.2 coding downstream 130728 4714732 ~ 4734142 (-)
XLOC_030785 CU915770.1 coding downstream 167503 4685675 ~ 4697367 (-)
XLOC_030784 NA coding downstream 191005 4670271 ~ 4673865 (-)
XLOC_030783 FO834903.1 coding downstream 221581 4640459 ~ 4643289 (-)
XLOC_030782 NA coding downstream 242807 4621430 ~ 4622063 (-)
XLOC_030788 zbtb43 coding upstream 13482 4921092 ~ 4931266 (-)
XLOC_030789 BX511196.1 coding upstream 34988 4942598 ~ 4942712 (-)
XLOC_030790 lmx1ba coding upstream 125223 5032833 ~ 5147336 (-)
XLOC_030791 NA coding upstream 248789 5156399 ~ 5158173 (-)
XLOC_030792 mvb12ba coding upstream 263644 5171254 ~ 5243111 (-)
XLOC_030793 NA non-coding upstream 391251 5298861 ~ 5301748 (-)
XLOC_030795 NA non-coding upstream 592193 5499803 ~ 5504425 (-)
XLOC_030799 NA non-coding upstream 1134456 6042066 ~ 6050725 (-)

Expression



Co-expression Network