XLOC_030784


Basic Information

Item Value
gene id XLOC_030784
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 4670271 ~ 4673865 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061923
TACAAGTCGTCTGCGTGTAAGAAAGTGTGTGTTCTGGGCTGGATTGTGGTTCTGCCGGATGATCCTGCTCAGCCCAACATCTTTCAGCTCAACGATCCTGATAAAGGAAATGTTTACAAGTTTCAGACTAGTGATCGTTTCTCTGCGATCTTATGGCACAAACACCTGGAGGAGGCCAGTAAGAGAAGAAGACCTCAGATACCAGCAAATCTCATGTCGTTTGAGTAAAGAGACTTGTGTAGCTCTTGCCTGcagacatttataatgtgccAAAAGGCCTACAGAGATGGAGGAGAACGTGTTTCAATCAGCAAACTCACGAAGAACGAGTGAAAACTTCAACATTAAGGAGTCACTGAGCCAAAGCACTGGATCTGTTCATCTGGACCACTGTTACAGACCAGATCTGCACTCTCGAATGGAGGAAAATCCAGCTTTATGAAGTCTTCAGTGTGGGGATTTATGCATCTGAAGGTGTTTGTTGATATTGCAATCGGTCAGGTATGTTTTAGAGGTCACACTTTACTATGAGGTTTCGTTAGTTAATGTGTTTtcaataaacaatacatatattacagtgtttattcAGGGTTGATCTATATAAAGTCAATTATTCTTATTTCTTGTTAACTCAGagtgcattaaataatgttaacaagcacaactttagattttaataatgcattaaaaggTATTAATAGGTGTTCTTTATCACACcgcaaaatgcttttcttactaagatgtttctaaaaatatctaaagattTATGAATTATGgagcatttta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061923 True 786 lncRNA 0.38 3 4670271 4673865

Neighbor

gene id symbol gene type direction distance location
XLOC_030783 FO834903.1 coding downstream 26982 4640459 ~ 4643289 (-)
XLOC_030782 NA coding downstream 48208 4621430 ~ 4622063 (-)
XLOC_030781 cst14b.1 coding downstream 137755 4523633 ~ 4532516 (-)
XLOC_030780 zgc:153704 coding downstream 176769 4482437 ~ 4493502 (-)
XLOC_030779 apooa coding downstream 251716 4382378 ~ 4418555 (-)
XLOC_030785 CU915770.1 coding upstream 11810 4685675 ~ 4697367 (-)
XLOC_030786 CU915770.2 coding upstream 40867 4714732 ~ 4734142 (-)
XLOC_030787 NA coding upstream 191005 4864870 ~ 4907610 (-)
XLOC_030788 zbtb43 coding upstream 247227 4921092 ~ 4931266 (-)
XLOC_030789 BX511196.1 coding upstream 268733 4942598 ~ 4942712 (-)
XLOC_030772 CU655870.1 non-coding downstream 733675 3935917 ~ 3936596 (-)
XLOC_030767 FO704648.2 non-coding downstream 1000033 3660658 ~ 3670238 (-)
XLOC_030764 NA non-coding downstream 1115462 3553600 ~ 3554809 (-)
XLOC_030791 NA non-coding upstream 482534 5156399 ~ 5158173 (-)

Expression


Co-expression Network