XLOC_030813



Basic Information


Item Value
gene id XLOC_030813
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 7376982 ~ 7377405 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061511
cgatggagggaatttggccagtaCACCAGCGTTacttacacccctactctttacgagaagtgccatgggatttttaatgaccacagagagtcaggacctcggtttaacgacTCATTCGAAAGACGTCGcacactgacagtatagtgtcctctttattatattggggcattaggactcaaatagactgcaggttgagcaccccctgctggcctcactaccaccacttccaacagcaatccatgtggtctcccatccaggtactaaccaggcttcagtgagtaactgctcttgggctgcagggtgatatggccaATGTGAAGGGtaatatgaaggaattaagttattattggttttaatcgttttaagtgtattggacataaaacaattaagatgttgcaaaaaaactcaagaatctcaagaattg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061511 True 424 lncRNA 0.44 1 7376982 7377405

Neighbor


gene id symbol gene type direction distance location
XLOC_030812 CABZ01087502.1 coding downstream 176984 7198757 ~ 7199998 (-)
XLOC_030811 CABZ01087503.1 coding downstream 228575 7148291 ~ 7148407 (-)
XLOC_030810 CABZ01041961.1 coding downstream 447834 6929034 ~ 6929148 (-)
XLOC_030809 ostf1 coding downstream 631471 6726155 ~ 6745511 (-)
XLOC_030807 tnks1bp1 coding downstream 809518 6515741 ~ 6567464 (-)
XLOC_030814 CU856253.1 coding upstream 54020 7431425 ~ 7431523 (-)
XLOC_030815 bmpr1ba coding upstream 110659 7488064 ~ 7712224 (-)
XLOC_030816 CABZ01069879.1 coding upstream 255290 7632695 ~ 7632819 (-)
XLOC_030817 pdlim5a coding upstream 344612 7722017 ~ 7844265 (-)
XLOC_030818 NA coding upstream 347659 7725064 ~ 7725275 (-)
XLOC_030808 CABZ01074478.1 non-coding downstream 845800 6531067 ~ 6531182 (-)
XLOC_030806 NA non-coding downstream 865143 6511314 ~ 6511839 (-)
XLOC_030804 NA non-coding downstream 904228 6471025 ~ 6472754 (-)
XLOC_030821 FP016143.1 non-coding upstream 595354 7972759 ~ 7972879 (-)
XLOC_030824 NA non-coding upstream 940313 8317718 ~ 8325015 (-)

Expression



Co-expression Network