Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188840 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 55634306 ~ 55634596 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106588136 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1355924 | True | 291 | lncRNA | 0.54 | 1 | 55634306 | 55634596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538789 | LOC106606674 | coding | downstream | 81806 | 55533247 ~ 55574537 (-) |
| LOC110485238 | LOC106601829 | coding | downstream | 124388 | 55434816 ~ 55509918 (-) |
| LOC110519575 | LOC106606659 | coding | downstream | 215245 | 55394864 ~ 55419061 (-) |
| LOC118936431 | LOC106601789 | coding | downstream | 292455 | 55334459 ~ 55341851 (-) |
| pvalb1 | pvalb1 | coding | downstream | 309996 | 55321599 ~ 55324310 (-) |
| LOC110486851 | LOC106606669 | coding | upstream | 394825 | 56029421 ~ 56036822 (-) |
| LOC110485237 | LOC106606659 | coding | upstream | 453696 | 56088292 ~ 56110984 (-) |
| LOC110539043 | LOC106601829 | coding | upstream | 490694 | 56125290 ~ 56203810 (-) |
| LOC110515093 | LOC106606674 | coding | upstream | 592447 | 56226179 ~ 56250925 (-) |
| LOC110486859 | srebf1 | coding | upstream | 1276769 | 56911365 ~ 56957646 (-) |
| G1188834 | NA | non-coding | downstream | 9245 | 55624859 ~ 55625061 (-) |
| G1188831 | NA | non-coding | downstream | 14250 | 55619657 ~ 55620056 (-) |
| G1188752 | NA | non-coding | downstream | 111037 | 55522939 ~ 55523269 (-) |
| G1188744 | NA | non-coding | downstream | 116848 | 55517190 ~ 55517458 (-) |
| G1189200 | NA | non-coding | upstream | 123573 | 55758169 ~ 55759029 (-) |
| G1189238 | NA | non-coding | upstream | 191786 | 55826382 ~ 55827154 (-) |
| G1189291 | NA | non-coding | upstream | 310059 | 55944655 ~ 55954153 (-) |
| G1189292 | NA | non-coding | upstream | 348375 | 55982971 ~ 56063191 (-) |
| G1189293 | NA | non-coding | upstream | 365408 | 56000004 ~ 56004128 (-) |
| LOC110516592 | LOC106601772 | other | downstream | 421591 | 55209614 ~ 55242150 (-) |
| LOC110486836 | LOC106606701 | other | downstream | 607858 | 55022619 ~ 55026465 (-) |
| LOC110485228 | LOC106606689 | other | downstream | 802984 | 54813122 ~ 54831352 (-) |
| LOC110486825 | LOC106606691 | other | downstream | 885648 | 54741479 ~ 54748709 (-) |
| G1189279 | LOC106601786 | other | upstream | 277628 | 55912224 ~ 55915885 (-) |
| G1189660 | LOC106601786 | other | upstream | 1035697 | 56670293 ~ 56674238 (-) |
| LOC110486894 | LOC106601810 | other | upstream | 1446221 | 57054453 ~ 57085521 (-) |
| G1190199 | LOC106601813 | other | upstream | 1454575 | 57089171 ~ 57089915 (-) |
