Gene
RNA
| Item | Value |
|---|---|
| gene id | G1190841 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 58219570 ~ 58219785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sacsin-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1358345 | True | 216 | lncRNA | 0.55 | 1 | 58219570 | 58219785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938643 | NA | coding | downstream | 222122 | 57995613 ~ 57997448 (-) |
| LOC118938562 | NA | coding | downstream | 224528 | 57994889 ~ 57995042 (-) |
| LOC118938645 | NA | coding | downstream | 225056 | 57989092 ~ 57994514 (-) |
| LOC118938642 | NA | coding | downstream | 236538 | 57981197 ~ 58002323 (-) |
| LOC118938561 | NA | coding | downstream | 238944 | 57980473 ~ 57980626 (-) |
| LOC110486937 | LOC106606542 | coding | upstream | 22722 | 58242507 ~ 58274289 (-) |
| iqck | LOC106606545 | coding | upstream | 132942 | 58352727 ~ 58371333 (-) |
| LOC110486946 | LOC106601863 | coding | upstream | 152884 | 58372669 ~ 58426053 (-) |
| LOC110538558 | LOC106606549 | coding | upstream | 234558 | 58454343 ~ 58499967 (-) |
| LOC110538556 | LOC106606549 | coding | upstream | 284965 | 58504750 ~ 58507829 (-) |
| G1190815 | NA | non-coding | downstream | 22769 | 58194166 ~ 58196801 (-) |
| G1190820 | NA | non-coding | downstream | 54058 | 58161454 ~ 58165512 (-) |
| G1190786 | NA | non-coding | downstream | 79683 | 58139599 ~ 58139887 (-) |
| G1190785 | NA | non-coding | downstream | 80270 | 58138987 ~ 58139300 (-) |
| G1190783 | NA | non-coding | downstream | 82351 | 58136499 ~ 58137219 (-) |
| G1190851 | NA | non-coding | upstream | 12375 | 58232160 ~ 58232435 (-) |
| G1190854 | NA | non-coding | upstream | 16961 | 58236746 ~ 58238710 (-) |
| G1190856 | NA | non-coding | upstream | 22020 | 58241805 ~ 58242275 (-) |
| G1190920 | NA | non-coding | upstream | 54689 | 58274474 ~ 58314123 (-) |
| G1190951 | NA | non-coding | upstream | 125397 | 58345182 ~ 58347543 (-) |
| G1190628 | NA | other | downstream | 225546 | 57964952 ~ 57994099 (-) |
| LOC110486915 | LOC106606556 | other | downstream | 512780 | 57698059 ~ 57706813 (-) |
| G1190405 | NA | other | downstream | 720415 | 57495988 ~ 57499155 (-) |
| G1190199 | LOC106601813 | other | downstream | 1129655 | 57089171 ~ 57089915 (-) |
| LOC110486894 | LOC106601810 | other | downstream | 1134099 | 57054453 ~ 57085521 (-) |
| LOC110514412 | NA | other | upstream | 367540 | 58561680 ~ 58588526 (-) |
| LOC110486955 | NA | other | upstream | 376991 | 58588778 ~ 58603975 (-) |
| G1191298 | LOC106606554 | other | upstream | 539938 | 58759723 ~ 58762086 (-) |
| G1191335 | NA | other | upstream | 648278 | 58868063 ~ 58868971 (-) |
| G1192082 | NA | other | upstream | 686368 | 58906153 ~ 58909232 (-) |
