G1196025


Basic Information

Item Value
gene id G1196025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 64560247 ~ 64601408 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1364735
ATAAAGCCGGTAAATGTAACATCTTGTTGGTTAATATGATAAAATGTTGTCTAATAACCTTTTCCACTTAATGTAATAAGTTATTGGTATCAGGTAACAACTTTTGTTAATGAATAACGTAATAACTTAAACCGATCATGTAATAACACCTAAACCAATGTTTAATGTGTTACTACACTAATGTTAATGCACATACCACCCTCCACCAAtttcaaacccacacacacacaaacctatgcCCTTGaactcacacacaaatacacacacaagcacacagttaGACACACATTGataaagaaaaaataataatgaatgaATCTGTAATTCGAATTGTCAATGAGACAGGGGGCTCGGTCGGGCAAGAGGAAGAAGGATTGGGAAACTAATTGCAAGTAATAATAACCTGAACTCCGCCTAGCAGAAAAATATTTGTATTAGCAACTATTACTTATTAGTTTATATTGTATTAAAGTTAAGG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1364735 True 478 lncRNA 0.33 2 64560247 64601408

Neighbor

gene id symbol gene type direction distance location
LOC110513421 NA coding downstream 1136 64548695 ~ 64559111 (-)
LOC110513419 LOC106601473 coding downstream 13337 64539228 ~ 64546910 (-)
LOC110487482 LOC106606373 coding downstream 197406 64334669 ~ 64362841 (-)
LOC110487478 LOC106596372 coding downstream 307594 64250942 ~ 64252653 (-)
slc6a16a LOC105029051 coding downstream 481311 64046974 ~ 64078936 (-)
LOC110485289 NA coding upstream 567 64601975 ~ 64611588 (-)
LOC110487475 NA coding upstream 13408 64614816 ~ 64624740 (-)
LOC110513424 LOC106606290 coding upstream 25766 64627174 ~ 64640045 (-)
LOC110510722 LOC106606296 coding upstream 40469 64641877 ~ 64662041 (-)
LOC110511879 LOC106606293 coding upstream 51970 64653378 ~ 64655487 (-)
G1196005 NA non-coding downstream 66727 64493036 ~ 64493520 (-)
G1196004 NA non-coding downstream 67334 64492394 ~ 64492913 (-)
G1195994 LOC106606292 non-coding downstream 70423 64488076 ~ 64489824 (-)
G1195998 NA non-coding downstream 82013 64478027 ~ 64478234 (-)
G1195993 NA non-coding downstream 83706 64475771 ~ 64476541 (-)
G1196056 NA non-coding upstream 20227 64621635 ~ 64622267 (-)
G1196024 LOC106601477 non-coding upstream 26014 64627422 ~ 64668426 (-)
G1196067 NA non-coding upstream 46343 64647751 ~ 64648256 (-)
G1196085 NA non-coding upstream 106945 64708353 ~ 64728928 (-)
G1195997 NA other downstream 82875 64476970 ~ 64477372 (-)
G1195624 NA other downstream 614483 63945076 ~ 63945764 (-)
LOC110485277 LOC106602060 other downstream 1054723 63495359 ~ 63509387 (-)
G1194933 NA other downstream 1422525 63137040 ~ 63137722 (-)
G1196113 NA other upstream 193240 64794648 ~ 64795071 (-)
G1196205 LOC106606311 other upstream 350382 64951790 ~ 64963785 (-)
G1196208 NA other upstream 355870 64957278 ~ 64961176 (-)
G1196409 NA other upstream 651871 65253279 ~ 65254078 (-)
G1196536 emp2 other upstream 868039 65446633 ~ 65472652 (-)

Expression


Co-expression Network