crygmxl2 (LOC106589324)


Basic Information

Item Value
gene id crygmxl2
gene name LOC106589324
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 17149378 ~ 17151329 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567354.2
GGAATGGTCCCTGACGTCTAAAAAGGTCACTTCTAGTCACTACAATGTAGACACAGGTCTATTTTACTGTCAGTAGAAGAGTATAAAAAAGGGCCTGAGAGTCTGCTGAGGGCTACGGTGCAGACATCAAGCCCTCCAACCATGGGAAAGATAATCTTTTACGAAGGCCACAACTTCCAGGGTCGACACTATGAGTGCAACAGTGACTGTGCTGACACGTTCAGACACTTCAACTGCTGTAACTCTATCAGGGTGACCGGCGGTCACTGGGTGGCCTACGAGAAGCCCAACTTCAACGGCTACCAGTACATCCTGAACCAGGGAGAGTACCCTGACCACCACCACTGGATGGGCTTCAACAACTGCATCCGTTCCTGCCAGATGTTCCCCCCCTACAGAGGAGCCTACAGAATGAGAATCTACAACAGGCCTGagatgtctggtcacatgatgGAGTTCATGGACGACTGCCCCAACGTGTATGAGCGTTTCCGCCACCGTGACATCTTCTCCTCCAATGTCATGGAAGGCTACTGGGTGTTCTACGAGCACCCCAACTACAGGGGTCGTCAGTACTTCCTCCGCCCCGGGGAGTACAGGGCCTGCAACGACTGGGCCTGCCACAACCCCATGGTGGGCTCCTTCAGGAGAATGAGGAGTGGCCTGTAAGCTTCTCACATCTGGACTGTAACAAAGTGATTAAAGGTGCTGGTTTTTCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567354.2 True 721 mRNA 0.52 3 17149378 17151329

Neighbor

gene id symbol gene type direction distance location
LOC110491462 LOC106579026 coding upstream 83860 16953436 ~ 17065518 (+)
LOC110491461 vti1a coding upstream 224496 16733423 ~ 16924882 (+)
LOC110491460 NA coding upstream 420791 16725000 ~ 16728587 (+)
sox8a sox8 coding upstream 461950 16684194 ~ 16687428 (+)
LOC118939513 NA coding upstream 702772 16435637 ~ 16446606 (+)
LOC110491464 LOC106579031 coding downstream 808 17152137 ~ 17156699 (+)
LOC110491467 NA coding downstream 35560 17186889 ~ 17197923 (+)
LOC110491468 LOC106579033 coding downstream 48528 17199857 ~ 17206714 (+)
LOC110491469 arf1l coding downstream 55709 17162511 ~ 17212117 (+)
LOC110492842 LOC106579341 coding downstream 84499 17235828 ~ 17305959 (+)
G1346743 NA non-coding upstream 51370 17065690 ~ 17098008 (+)
G1346763 NA non-coding upstream 196942 16952235 ~ 16952436 (+)
G1346762 NA non-coding upstream 199071 16950074 ~ 16950307 (+)
G1346761 NA non-coding upstream 200277 16948896 ~ 16949101 (+)
G1346725 NA non-coding upstream 253756 16879968 ~ 16895622 (+)
G1347308 NA non-coding downstream 6996 17158325 ~ 17159636 (+)
G1347310 NA non-coding downstream 9112 17160441 ~ 17160739 (+)
G1347311 NA non-coding downstream 9869 17161198 ~ 17161438 (+)
G1347312 NA non-coding downstream 10225 17161554 ~ 17161900 (+)
G1346758 NA other upstream 203134 16945928 ~ 16946244 (+)
G1345431 NA other upstream 1605841 15542391 ~ 15543537 (+)
G1345417 LOC106579048 other upstream 1624810 15524002 ~ 15524568 (+)
G1345170 NA other upstream 1665865 15483147 ~ 15483513 (+)
G1345084 LOC106578999 other upstream 1781922 15280053 ~ 15367456 (+)
LOC110491483 LOC106579330 other downstream 445390 17596160 ~ 17623382 (+)
G1348897 LOC106579309 other downstream 1403848 18555177 ~ 18555452 (+)
LOC110491516 LOC106589273 other downstream 1601294 18682058 ~ 18760420 (+)

Expression


Co-expression Network