XLOC_032671


Basic Information

Item Value
gene id XLOC_032671
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 13070899 ~ 13071419 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064713
GAAAAACCAATCGGTGTTATCGTACACGTCAAAGCGTAAAAGagtgttcatatatttttaattattattcagtgattcctccgcataccactagaaggaagcctgtgtgccacactttgagaaccactggtatagatagatagttagggcttgtctgtgtcaggttttttctttttcagctattggagagcaggcagaagagggagactACCAAGAGAATCGGTGGAAATTTATGTAAAAATGCTGGAGAACAGCAGGGAGGGTTTTGTTGGGGCTgtctttttttcattgttttttttgcagattggagtggagcagaagaaggagactcacaaggGAAACGGTGGAGATATACTTGAAGACCTGGAGCTCAAAAAGCAGattgGCATGAAGCATGTGGAGAAACAGGGAATCACACCTCAGTTATGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064713 True 429 lncRNA 0.42 2 13070899 13071419

Neighbor

gene id symbol gene type direction distance location
XLOC_032670 tmbim1a coding downstream 48733 12996038 ~ 13022166 (-)
XLOC_032669 ical1 coding downstream 148881 12870744 ~ 12922018 (-)
XLOC_032668 bmpr2a coding downstream 202498 12797648 ~ 12868401 (-)
XLOC_032667 dock9b coding downstream 282360 12593986 ~ 12788539 (-)
XLOC_032666 slc15a1b coding downstream 482855 12556427 ~ 12588044 (-)
XLOC_032672 casp20 coding upstream 12246 13083665 ~ 13114844 (-)
XLOC_032673 adam23a coding upstream 65183 13136602 ~ 13188667 (-)
XLOC_032674 eef1b2 coding upstream 118144 13189563 ~ 13206255 (-)
XLOC_032675 kcnj3b coding upstream 204603 13276022 ~ 13308813 (-)
XLOC_032676 arl6ip6 coding upstream 276429 13347848 ~ 13376150 (-)
XLOC_032665 CR376780.1 non-coding downstream 656570 12414215 ~ 12414329 (-)
XLOC_032660 NA non-coding downstream 1222413 11815169 ~ 11848486 (-)
XLOC_032658 NA non-coding downstream 1311031 11722431 ~ 11759868 (-)
XLOC_032655 NA non-coding downstream 1652435 11417253 ~ 11418464 (-)
XLOC_032653 NA non-coding downstream 1821045 11248505 ~ 11249854 (-)
XLOC_032680 NA non-coding upstream 668961 13740380 ~ 13746402 (-)
XLOC_032681 NA non-coding upstream 689947 13761366 ~ 13778704 (-)
XLOC_032682 CU929360.1 non-coding upstream 693891 13765310 ~ 13765427 (-)
XLOC_032684 dre-mir-375-1 non-coding upstream 728674 13800093 ~ 13800172 (-)
XLOC_032686 NA non-coding upstream 870148 13941567 ~ 13946875 (-)

Expression


Co-expression Network