XLOC_033404 (BX000524.1)


Basic Information

Item Value
gene id XLOC_033404
gene name BX000524.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 5737873 ~ 5784153 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065430
CTTTTTGACCGCCATGCTGTGAGAACgggtttatgtttgttttgatgtttacttttaattttgGGAAAGGACAGTAAATGGATTTGAATATCCAACTTTATTTACAAAGAAAGCAGAATGAAGAAGGAGAGCTGAAGACCTCCAACTACAAGCTGATATGAGGAGCAGCTGAATCTAAATGAGCTTCAACAGACTGAAGACTTCAGCAACTCATTCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097204

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065430 True 217 lncRNA 0.38 2 5737873 5784153

Neighbor

gene id symbol gene type direction distance location
XLOC_033403 BX005156.1 coding upstream 129836 5573759 ~ 5608037 (+)
XLOC_033402 si:ch211-165f21.4 coding upstream 165627 5566582 ~ 5572246 (+)
XLOC_033401 BX005156.2 coding upstream 173336 5561558 ~ 5564537 (+)
XLOC_033400 BX005156.2 coding upstream 180775 5556407 ~ 5557098 (+)
XLOC_033399 si:dkeyp-67a8.4 coding upstream 188569 5529967 ~ 5549304 (+)
XLOC_033405 NA coding downstream 29992 5814145 ~ 5818376 (+)
XLOC_033406 NA coding downstream 42428 5826581 ~ 5827500 (+)
XLOC_033407 hist1h2a11 coding downstream 119867 5904020 ~ 5904598 (+)
XLOC_033408 CU459186.4 coding downstream 120938 5905091 ~ 5905740 (+)
XLOC_033409 zgc:112234 coding downstream 122174 5906327 ~ 5906995 (+)
XLOC_033397 NA non-coding upstream 410040 5323983 ~ 5327833 (+)
XLOC_033396 FP236789.1 non-coding upstream 547977 5189778 ~ 5189896 (+)
XLOC_033416 NA non-coding downstream 159657 5943810 ~ 5947127 (+)
XLOC_033428 NA non-coding downstream 269692 6053845 ~ 6057362 (+)
XLOC_033429 NA non-coding downstream 465239 6249392 ~ 6252661 (+)

Expression


Co-expression Network