XLOC_033490


Basic Information

Item Value
gene id XLOC_033490
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 11593801 ~ 11595516 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068783
gggctcgtccgggataggagGGAGGTTTAAGGGGGTGAATGTAACGAAGGCCAGCTAACAAAGTGCTTTGCAGGTAAACCtcgctcctctgacctcaaaaggtgctctagttaCAGATgctagaagccatggtctttagccttcttgttagagaaACCGACTCACAAAGAATCgacagttcgatcccagctcagagcaggttgggtgcagtaTGACCAGTGGGTTACAATACGAAAAGTTGTGAAATATTCACATAGTATGTCTCGaaggaaatgtaactgtgatatgCAAAGGATTCGAAAGCATTGAGGTCGGAAGTGAGACATTTCATTTTGTTCTGACTGTATCTGAAATGCAGAAACGAAAAAAAGAAATCACATAATAGGTACTGAACCCAAAAGTGAGGTGTATCAAACTTAACTGCACCATAGCATGCAGTGGAAATGCACCTTTAGTAGACAGCAAGGCAGCTCAGTGGGTTTTAGAACAGAGCCGTTAAGTCTAAAAAGTTAACAAAGCCACATATCATGGTTATTATACATAGGGGATCACTCCAAGTCTAAAAAACTGACCAATTGGCAAAACATGATGCTACCAGTATCAACAAAATGTCTTCAATTTTCACACAAAGAGATCGATAAAACGTCATTTGAAagcactttggataaaagcatctgccaaatgcataacTGTAGGTTTTTCTGTGCAATAGTTCATCACTTGTATCACTAGTTTTCAGAATTTCTGAAATAATACAGTAAACAAAATGTTCCAGTAGTCTAGATCTATAAAACGGTCTATGTTCAAGTGTGTTTGGACACGTGTGACTTTTGGAAGAATCAGGAATAAAGTAACCTCACTTTTCACTAaaatcaaaagtaatcaaatcaaattattaaaagtttcaGAATTAATCTTAAAGGGACGGGGGTGTGCTCTATAAAGTGGCTATTTGAGGGATTTGACAGCTTTGGTCAGGTTGTTGTAAAACTCCACCATACTAGTGGGGAAAAATGAATCTACAACCGAACGAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068783 True 1035 lncRNA 0.39 2 11593801 11595516

Neighbor

gene id symbol gene type direction distance location
XLOC_033488 tlnrd1 coding upstream 200608 11390462 ~ 11393193 (+)
XLOC_033486 cemip coding upstream 251190 11197022 ~ 11342611 (+)
XLOC_033487 CR847996.1 coding upstream 380277 11213408 ~ 11213524 (+)
XLOC_033485 NA coding upstream 558188 11034549 ~ 11035613 (+)
XLOC_033484 abhd17c coding upstream 587882 10911396 ~ 11005919 (+)
XLOC_033491 NA coding downstream 94142 11689658 ~ 11819578 (+)
XLOC_033492 NA coding downstream 273118 11868634 ~ 11869584 (+)
XLOC_033493 CU914775.1 coding downstream 576613 12172129 ~ 12172246 (+)
XLOC_033494 saxo2 coding downstream 775545 12371061 ~ 12380200 (+)
XLOC_033495 cx36.7 coding downstream 1239532 12835048 ~ 12836225 (+)
XLOC_033482 LO018300.1 non-coding upstream 910194 10683487 ~ 10683607 (+)
XLOC_033481 NA non-coding upstream 912145 10667471 ~ 10681656 (+)
XLOC_033477 CU184872.1 non-coding upstream 1345614 10248072 ~ 10248187 (+)
XLOC_033496 CABZ01068862.1 non-coding downstream 1257587 12853103 ~ 12853217 (+)
XLOC_033501 CU571326.1 non-coding downstream 1744627 13340143 ~ 13340268 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location