XLOC_033495 (cx36.7)


Basic Information

Item Value
gene id XLOC_033495
gene name cx36.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 12835048 ~ 12836225 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065546
CATGGCTGGGAGCAGTGATGGCACCTTCGCTCTCCGGCCAGAGCTGTAACATGAAAACGGCCGTCCTCGCTGGCAGCAGAGCTAAAGTGGAGCTATTTCAGGTGCTGTACTTCAATCGGCCGGCACGCAGAGACATGACAGAATGGACGCTGCTGAAGCGGCTGCTGGACGCCGTGCACCAGCACTCCACCATGATCGGACGCCTCTGGCTCACAATAATGGTGATTTTCAGATTGCTGATCGTCGCAGTGGCGACCGAAGACGTCTACACTGATGAGCAGGAGATGTTCGTGTGCAATACTCTCCAACCGGGATGTCCGAACGTCTGCTATGATGCATTCGCGCCAATATCGCAACCACGTTTTTGGGTCTTCCAGATCATCACGGTCTCCACGCCGTCGCTTTGTTTTATTATCTACACCTGGCACAACTTGTCCAAACAACCCGAAGGTGAGCAGATAAAGGAAGCGCTTGAGAGGAGCTGCGACTCGGAGAGTTGCTCCATTAAATCGCATAAACACATAAATCCAAGCCTTGAAGGAGTCACCAACCAGAAACCATCGCAAGCATCGAAAACCTCTTCGGGAGTCCTTTCGAAGTATTACATCTTCCACGTTTGCTTTCGTACCATTCTGGAAGTGGCCTTTGTAGTGGCCCAGTGGCTGCTTTTCGGCTTCCGCGTCCCAGCTCATTTCGTTTGCACGTCTTCCCCTTGCATGCAAAGCGTCGACTGCTACGTTTCTCGTCCCACGGAGAAAACCGTTTTTCTTATCTTTATGTTCTGCGTTGGAGTTTTCTGCATCTTCTTGAACTTCTTAGAGCTCAATCATTTGGCTTGGAAGATGATCAAGAGGTCTGTGCTGGTCAAGGACGGATCCTGGAATGGATACGGCGCTATAAACCAAGACTCGCAGTCGATCGCTTCTTTGACGTTTCGAGATGTTACCAGCACTACATCACTACCGACTCTTGATCTAGTTGTGGATCACCAACCTGACTGGACATGCGCTGCAAACTGCTCGACAAAGAAGGACAATAGAGGAACACAGAGTAAACCCAAGACAAACAGAAAAGCAAAACAGAGGAGCACTGAGGTTTGGATATAAAAGTCAATCCAGGACAATTTCCAGAGTCTTAAATTTGATGTTCACCCAATAAAAACGAACGTTTACTCATAA

Function

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0055003 cardiac myofibril assembly biological_process
GO:0007267 cell-cell signaling biological_process
GO:0007154 cell communication biological_process
GO:0005886 plasma membrane cellular_component
GO:0005921 gap junction cellular_component
GO:0005922 connexin complex cellular_component
GO:0030054 cell junction cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0055077 gap junction hemi-channel activity molecular_function
GO:0005243 gap junction channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050616-5 Enables gap junction hemi-channel activity. Acts upstream of or within cardiac myofibril assembly. Located in plasma membrane. Is expressed in heart; heart primordium; margin; and primitive heart tube. Orthologous to human GJD2 (gap junction protein delta 2).

Ensembl:

ensembl_id ENSDARG00000017927

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065546 True 1178 mRNA 0.49 1 12835048 12836225

Neighbor

gene id symbol gene type direction distance location
XLOC_033494 saxo2 coding upstream 454848 12371061 ~ 12380200 (+)
XLOC_033493 CU914775.1 coding upstream 662802 12172129 ~ 12172246 (+)
XLOC_033492 NA coding upstream 965464 11868634 ~ 11869584 (+)
XLOC_033491 NA coding upstream 1015470 11689658 ~ 11819578 (+)
XLOC_033489 il16 coding upstream 1210215 11459235 ~ 11624833 (+)
XLOC_033496 CABZ01068862.1 coding downstream 16878 12853103 ~ 12853217 (+)
XLOC_033497 fth1a coding downstream 91719 12927944 ~ 12936708 (+)
XLOC_033498 saa coding downstream 114282 12950507 ~ 12956434 (+)
XLOC_033499 slc25a22b coding downstream 139948 12976173 ~ 12999913 (+)
XLOC_033500 syt7b coding downstream 203201 13039426 ~ 13338283 (+)
XLOC_033490 NA non-coding upstream 1239532 11593801 ~ 11595516 (+)
XLOC_033487 CR847996.1 non-coding upstream 1621524 11213408 ~ 11213524 (+)
XLOC_033501 CU571326.1 non-coding downstream 503918 13340143 ~ 13340268 (+)
XLOC_033509 NA non-coding downstream 961419 13797644 ~ 13800139 (+)
XLOC_033511 NA non-coding downstream 1026084 13862309 ~ 13865084 (+)
XLOC_033515 CU467822.1 non-coding downstream 1444868 14281093 ~ 14281225 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000105_01097495_01098649 CX36.7 coding CI01000105 null 1096499 ~ 1099165 (+)