XLOC_033497 (fth1a)


Basic Information

Item Value
gene id XLOC_033497
gene name fth1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 12927944 ~ 12936708 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065548
ATTATCGTTTCAGCGACCACACGAGGACAGACTGAAGGTTACCTGCTTCAACAGTGCTTGAACGGCAACCGATCTTCTGTCTTTTTCGCCATTTTCATCAATCGACTTCAATTCCAAGCATTTTGTTTTCGGTCAAAATCGAAAGTTTTGTTTTAAGACGCTTTGCTTTGAAACATCTGCGCAAACCCGCGTCATTGACCATCTCTACGAATAACACCAGAAACGCAGTAAAACCGATCTAAGAAACATGAGCTCTCAGGTGAGACAGAATTTTGAGGAGGCCTGCGAAGCGGCCGTTAATCGTCAGATCAACATGGAGCTCTATGCATCTTACGTCTATCTTTCTATGTCGTACTACTTCGACCGAGACGATCAAGCTCTGCACAACTTTGCAAAGTTTTTCCGCCATCAGTCCCACGAAGAGCGCGAACATGCTGAGAAACTGATGAAATTTCAGAACCAGAGGGGAGGGAGGATCTTTCTGCAGGACGTGAAGAAACCAGAGAAGGACGAGTGGGGAAGTGGTGTGGAGGCGCTGGAGTGTGCCCTGCAGCTGGAGAAAAGCGTCAATCACTCCCTGCTGGAGCTCCACAAGCTGGCATCTCAACACAACGACCCTCACATGTGCGATTTCATTGAGACACACTACTTGGACGAGCAGGTCAAATCCATCAAAGAACTGGGCGACCATGTGACCAACCTGCGCCGCATGGGTGCCCCGCAAAACGGCATGGCTGAGTACATGTTCGACAAGCTCACGCTTGGCAAAGAGAGCAGCTAAAGGCTCCGTCCATCTTTGTTTTCCTTTGCTGATTAGTATTGCTATATAAGTGTTTATTACTCTACATGCCATCCAACTCTATTTTATGTTAACCGGTCATCACGTGTGGCTGGATATTTAAGCAGAACCTCCTAGCTTGTTGGGAATCCGACATGCTTTGCTGTTTAAAGTTTCACTTCGTACCAAAAGCCATTGCATTTTCTCCAGCTCGTTCACAGTTTGACCTCTCTGCATCTGCATGTGCTGCTTGTGTGATCTGTCAATCAAATTATGCTCCAAACCCAATAAAGCAAAACCTCTGGAATCTGAA
>TCONS_00065549
cagAAACATGAGCTCTCAGGTGAGACAGAATTTTGAGGAGGCCTGCGAAGCGGCCGTTAATCGTCAGATCAACATGGAGCTCTATGCATCTTACGTCTATCTTTCTATGTCGTACTACTTCGACCGAGACGATCAAGCTCTGCACAACTTTGCAAAGTTTTTCCGCCATCAGTCCCACGAAGAGCGCGAACATGCTGAGAAACTGATGAAATTTCAGAACCAGAGGGGAGGGAGGATCTTTCTGCAGGACGTGAAGAAACCAGAGAAGGACGAGTGGGGAAGTGGTGTGGAGGCGCTGGAGTGTGCCCTGCAGCTGGAGAAAAGCGTCAATCACTCCCTGCTGGAGCTCCACAAGCTGGCATCTCAACACAACGACCCTCACATGTGCGATTTCATTGAGACACACTACTTGGACGAGCAGGTCAAATCCATCAAAGAACTGGGCGACCATGTGACCAACCTGCGCCGCATGGGTGCCCCGCAAAACGGCATGGCTGAGTACATGTTCGACAAGCTCACGCTTGGCAAAGAGAGCAGCTAA

Function

symbol description
fth1a Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm. Is expressed in blood; eye; liver; ovary; and testis. Human ortholog(s) of this gene implicated in hemochromatosis type 5. Orthologous to several human genes including FTH1 (ferritin heavy chain 1).

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0006880 intracellular sequestering of iron ion biological_process
GO:0006826 iron ion transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0008198 ferrous iron binding molecular_function
GO:0008199 ferric iron binding molecular_function
GO:0004322 ferroxidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-000831-2 Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm. Is expressed in blood; eye; liver; ovary; and testis. Human ortholog(s) of this gene implicated in hemochromatosis type 5. Orthologous to several human genes including FTH1 (ferritin heavy chain 1).

Ensembl:

ensembl_id ENSDARG00000015551

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065548 False 1091 mRNA 0.47 5 12927944 12936708
TCONS_00065549 True 541 mRNA 0.52 4 12931396 12936398

Neighbor

gene id symbol gene type direction distance location
XLOC_033496 CABZ01068862.1 coding upstream 74727 12853103 ~ 12853217 (+)
XLOC_033495 cx36.7 coding upstream 91719 12835048 ~ 12836225 (+)
XLOC_033494 saxo2 coding upstream 547744 12371061 ~ 12380200 (+)
XLOC_033493 CU914775.1 coding upstream 755698 12172129 ~ 12172246 (+)
XLOC_033492 NA coding upstream 1058360 11868634 ~ 11869584 (+)
XLOC_033498 saa coding downstream 13799 12950507 ~ 12956434 (+)
XLOC_033499 slc25a22b coding downstream 39465 12976173 ~ 12999913 (+)
XLOC_033500 syt7b coding downstream 102718 13039426 ~ 13338283 (+)
XLOC_033501 CU571326.1 coding downstream 403435 13340143 ~ 13340268 (+)
XLOC_033502 dagla coding downstream 446144 13382852 ~ 13487378 (+)
XLOC_033491 NA non-coding upstream 1108366 11689658 ~ 11819578 (+)
XLOC_033490 NA non-coding upstream 1332428 11593801 ~ 11595516 (+)
XLOC_033509 NA non-coding downstream 860936 13797644 ~ 13800139 (+)
XLOC_033511 NA non-coding downstream 925601 13862309 ~ 13865084 (+)
XLOC_033515 CU467822.1 non-coding downstream 1344385 14281093 ~ 14281225 (+)
XLOC_033517 NA non-coding downstream 1377643 14314351 ~ 14370213 (+)

Expression


Co-expression Network