G1421990


Basic Information

Item Value
gene id G1421990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13503157 ~ 13504047 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1627561
tacagctgcaccgatcggtaagctgctctgacagccgatgcttgaagttagtgagggagatataagtctccaacttcagtgatttttgcaattcgttcaagtcattggcagcagagaactggaaggaaaggtggccaaagggggtgttggctttgggggtgaccagtgagatatacctgctggagcgcgtgctacttcAGTAGGTGGGTGCTGCTtcagtgaccagtgagctgagataaggcagggctttacctagcaaaggcttatagatgacctggagccagtgggtttggcaacgaatatgtagcgaggaccaaccaacgagagcacacaggtcgcaatgatgggtagtatatggggctttgttgacaaaacgggtggcactgtgatagactgcatccaatttgctaagtagagtgttggaggctattttgtaaattacattatggatgaatgatggatagagggatggagagagggagggagagagtgagacagaatgAGCAGGGAGGGGTGGCTCATCGGTCTAAGGCacttaggggagggtttggccagccgggatgtccttgtcccatcgtgctatAGCGACTCCTGttggcgggccgggtgcTTGTCCCATCGCGCTATAGCGACTCCTGTTGGCGGGCCGGGTGCCCGTCCCATCGCACTATAGCGACTCCTGTTGGCGGGCCGGGTGCTTGTCCCATCGCGCTATAGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1627561 True 719 lncRNA 0.54 3 13503157 13504047

Neighbor

gene id symbol gene type direction distance location
tmc6b LOC106593098 coding downstream 1946 13459621 ~ 13501211 (-)
LOC118940038 NA coding downstream 42434 13460182 ~ 13460723 (-)
LOC110493418 LOC106564347 coding downstream 122759 13378175 ~ 13380398 (-)
LOC110493417 LOC106564349 coding downstream 132448 13346096 ~ 13370709 (-)
LOC110485496 LOC106592261 coding downstream 163452 13303807 ~ 13339705 (-)
LOC118940028 kith coding upstream 68164 13572211 ~ 13576259 (-)
LOC110493422 LOC106564358 coding upstream 103300 13607347 ~ 13627739 (-)
LOC110485508 LOC106564355 coding upstream 124107 13628154 ~ 13644563 (-)
tekt4 LOC106564280 coding upstream 234015 13738062 ~ 13747411 (-)
LOC110493414 NA coding upstream 251478 13755525 ~ 13759636 (-)
G1421987 NA non-coding downstream 3375 13499547 ~ 13499782 (-)
G1421977 NA non-coding downstream 6887 13472930 ~ 13496270 (-)
G1421978 NA non-coding downstream 21085 13479291 ~ 13482072 (-)
G1421945 NA non-coding downstream 66822 13435933 ~ 13436335 (-)
G1421993 NA non-coding upstream 4147 13508194 ~ 13509791 (-)
G1421995 NA non-coding upstream 10942 13514989 ~ 13515748 (-)
G1421997 NA non-coding upstream 13338 13517385 ~ 13518103 (-)
G1421959 NA non-coding upstream 33992 13538039 ~ 13538682 (-)
G1422002 NA non-coding upstream 36150 13540197 ~ 13541425 (-)
LOC110485492 LOC106592221 other downstream 202739 13286956 ~ 13300529 (-)
LOC110485494 LOC106591833 other downstream 217654 13280562 ~ 13286294 (-)
pcyt2 pcy2 other downstream 248331 13222056 ~ 13254849 (-)
G1421744 NA other downstream 657000 12845797 ~ 12846157 (-)
G1422007 NA other upstream 76893 13580940 ~ 13581565 (-)
LOC118940035 NA other upstream 268092 13772139 ~ 13781710 (-)
G1422125 LOC106595916 other upstream 352829 13856876 ~ 13858250 (-)
LOC118940029 exosc1 other upstream 362373 13863439 ~ 13868827 (-)

Expression


Co-expression Network