G1422717


Basic Information

Item Value
gene id G1422717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 14573490 ~ 14577709 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1628559
TTTTAAACCAGTCAGATTATGAGCAGATTTTATTCTGCCCCACGCCGACACACACGTCATTTAGACAGAACAGAAGTTGAATTAGAACCTTGTGACATCACAGCTGTTGAAAGACACTTCCTCATACAACAATGGATTCAATAGAACACAACTGAACTAACAGGTTTCTGGTGCGATCATTTTGTTGGTGTATTAAAGTGAAGTGAGACACAGAATTTGCAAATAAACTTCATAAATGTAAAATAAGTGAGGAACTCAAATCGACACTATTTCATTTAgatcagtggtggtggtggtgatcaAATGGCAAATCAAAACCACATAGAGAACCAATGATGTAACACGATAAAACAATGGACAAGAAGTGAAACATACACATCGCCCCTACAACTACAGAAAACAAAACGCAATCAATTAACAACCCATAACTAAACTACAAATCACATACTTACAGAAGTCTTGGCTATCGATCAATCATAGATACAAAGGTTGCTTCACTGGGGAGGTTACATTTGAACAgtaaggctgcatttacacaggcagcccaattctgatctttttcccaattattggcaaaagatctgATCTCACTggtcaaaagatcagaattgggctgcctgtgtagacGCCGCCTTACAAGGCCACGCTGGACATTAGGGGGTATGTTCAGGATTGCAAACAACACATTGCAACATCACTCATCTCCCATACACAAACCCGACAGTTATGAACACAAGGCAACAGTTTGATAATCCTGAATATGCCCTTCAGTTTTTGCTCAAGTGCGTGCCATCATGGCTTTAAATGATTTTGTCCACGGTTTTATAATGTAAATATATGGACAGTTTGAGGAGGTTGATTGGGCAAATAGAGTGTATACACCATCGCGTTTGAGCCTTCTGTAGGAAGGACACTTCACACAGGCACTAGCATAAAAGTTGAAATGGTTGGTGACActatcagtggaggctgttgaggggaggacggctcatattaatgtctggaatggaatcaaacataAGACAACCACGTGTCtgataccattccagccattattctgagccgtcctcccctcagcagcctccactgtcctGTATACATAGAAATACAGAGGGAGTGTTTCCACCCTCCCTAAATGTTTCCATTAGCCTTGCATAGTAGCATCACTCATATTTAATAAATGCaactctgtgtcccaaatggcaccctaatccatATGTAGTGCACATCTTTAGACTAGTGCCCATatagtgtagtgcactatatagggaatagggtgccatttgacacaCACAGTGAGGTCTTCCCTTTGGCCAAGTGGACTCCAATGATGTGTTTATATACAACGTATCTTTGTGTGTCTATATTTACCTACACACATCTATATGTGAATATGTACATCTATGCTTGTCTATGGTGGACTCAAGGTCACCATGGTGTCAACATTACATACAGTAAGTCTAAGGCACCGTCAACAAAGTATACCAGGGTTCTTGTTAAGGAGAAGTGCATAACATTTCCATAGAAGCCAGTCTTTAATGGATTCTACGTTTTCAGTCTTATCCTTTAATGGATTCTACGTTTGCTGTTTTCAGTCTTATCCTTTAAAGGATTCTACGTTTTCAGTCTTATCCTTTAATGGATTCTACGTCTGCTGTTTTCAGTCTTATCCTTTAAAGGATTCTACGTTTTCAGTCTTATCCTTTAAAGGATTCTACGTTTTCAGTCTTATCCTTTAATGGATTCTACGTCTGCTGTTTTCAGTCTTATCCTTTAAAGTCGCAATCAGccgttgaaacaataacaaaccgTCTCCCCACccgtttcggtaaaaagctgagggacggGGCTCAAACTCAAGAGTTATGGATacgaggactgaccatccatgatatcaaaattatagttaaccatgttgaggctaaatagtgtttgtttacatttactttgtttacaaacattggcgtAAACAATGCttgttttgggttctgatggggtacaacaatTGAACTAACCTCATGAGGAATTTATAAGttctattcttcaagaatcaattgaTACATATCATTAATATGTCCAAACATGTATCTGCAGGTTGCCACTTTAAAGAAGCAATTGATGAAATCACAAGTATTGTATTGTTATCAAGTGCTTAAGTTAGTCCTGTATGACTTACATTTAAAGTCAGTCAGATGATTTGAAGTAGTAATCTATGAAGTGCCAAAGCACACTTGGACCTTGGTGGACCGGAGCTATACAGCAGCCCTTGGTCgtgttcattagtgcacaccacaGCAAAACCTCTTGCAATGATAAACAAACTAAGCATTTGCCTGATGAAAACCTTCCAACTGTTTTACTTGTTTTGAAAGCAGTAACTCCCCTCAATGTACTCTGAACATTTAATGACTCTAGGACCAAGAAAATGTATTCAAAACAGCTTCTGAAGTTCGGTAATTGTGTGTTTGTTAATATGTAGCCggtttttcttccatttggtgcctaatgaacatgacccagctgCAACACTGAGGTTCCTGAAGTCAGTCTTGGCAGTAAGAGGATTTATTCATGAATGACTTTTCCCTTTAGTAGTACAAAGCAGGGAGTGGTCTGAGACTCAGAACGACTGATAGGAAACCCACTAAGTAATACAAACCATAGATGGCTTTATCTAGCGGCAGTGGAAGACTTCTGTTCTGATTCTCCCCCCTTTCCAGTGCACATGGTTCTAAAAGCACAGCACTGGTGTCAGGATTGGCTGTGAGGCTGGAGGGAGATTCCATTGTCAAAGCCATAGGGGGGGAAAGTAGGCCAGTGCAGTGCACGCTTTGGGAGAAGGGTGGACAATTGGGACTCTAATTTATCACCTGGTTTCAACCTATCCAATTGCTATAGTTTTTGTGGACAGTAGACATAAAAATATGACTGAAAACTGAATCAGTACATAAATGACTAGATAGGAACATGCATATTACACAGATCAGTTGAGCAAACAAGCCTGGTGTTTTCTACGGGCGGTTTAATTTAACGTGTGGTTTAATGAGCGGTTTAATGTGTTTTTTATGGCTTTACCTTGACTGTTATCAGATCGACAGGGTTTAAGAGTTATGAGAAAGGACTTGTAGCCTGaatcctaaatgacaccctatcccctatatatagtgcactacttttaaccagagccttatgggtcctggtcaaaagtagtgcactataaagggaattgggtgccatttgggacacagccaaagTCTGCCTACGGCTCCTGAAGTGGGACAAAAACCCAGCAGTTTACATAGGACATTAATAGTAAGGCTTTCTTGGGCATTTGGCTTATCCTGTAGAATTCAGTAGTCTCACGATACACTGGTCAATGAAATAAACATACTTCTTTGACATTGAATAAAACATTGTGCTTGCATGTCGTCAAGATAATTGTGCTAAattgaaaacaaaaagataaaatgtttttaaaaaaagacACTACAGCCATTCAAAGAATTGGCGTTTCAACTATGAATATCTAGTATGTACagacaccagaggaggctggtgggaggaagaTATAGGAGGATCGGCTCactaatggctggaatgaaataAATGGAActgagtcaaacgtggtttccatatttgataccgttccatttattccatcccagccattacaatgagcaggTCCTCCTATAtcttcctcccaccagcctcctctgacagaCACACATTCTCCTTCCTTCTGGAGCACAGAAGCAGGGGACTACAGTtctgaacagagagggagggagacaagcACACTGATTAGCTAAAGCAAGCACTTGCCCCTCCCACGAGAGCTCTCATTGgctgttttttgcatatcccaaatCATGTGAGCTCCAGTGTCACGTGACCAGGACCTGACTTTTGCCCGTCTCAGGGTAGAAGTCTCCTTTTAACCACATCATCCACTGAATTAGTAGTAGGCAGACCTGTGTTCAAACACTATTTAAAACCATTTCAAATACTTTACCGGTCTGTGCTTTCATCCACTTTCCCTGTTGCAAATTAAACCAATAGAAAGGTTGACAGACCCCACCCAC
>TU1628558
TTTTAAACCAGTCAGATTATGAGCAGATTTTATTCTGCCCCACGCCGACACACACGTCATTTAGACAGAACAGAAGTTGAATTAGAACCTTGTGACATCACAGCTGTTGAAAGACACTTCCTCATACAACAATGGATTCAATAGAACACAACTGAACTAACAGGTTTCTGGTGCGATCATTTTGTTGGTGTATTAAAGTGAAGTGAGACACAGAATTTGCAAATAAACTTCATAAATGTAAAATAAGTGAGGAACTCAAATCGACACTATTTCATTTAgatcagtggtggtggtggtgatcaAATGGCAAATCAAAACCACATAGAGAACCAATGATGTAACACGATAAAACAATGGACAAGAAGTGAAACATACACATCGCCCCTACAACTACAGAAAACAAAACGCAATCAATTAACAACCCATAACTAAACTACAAATCACATACTTACAGAAGTCTTGGCTATCGATCAATCATAGATACAAAGGTTGCTTCACTGGGGAGGTTACATTTGAACAgtaaggctgcatttacacaggcagcccaattctgatctttttcccaattattggcaaaagatctgATCTCACTggtcaaaagatcagaattgggctgcctgtgtagacGCCGCCTTACAAGGCCACGCTGGACATTAGGGGGTATGTTCAGGATTGCAAACAACACATTGCAACATCACTCATCTCCCATACACAAACCCGACAGTTATGAACACAAGGCAACAGTTTGATAATCCTGAATATGCCCTTCAGTTTTTGCTCAAGTGCGTGCCATCATGGCTTTAAATGATTTTGTCCACGGTTTTATAATGTAAATATATGGACAGTTTGAGGAGGTTGATTGGGCAAATAGAGTGTATACACCATCGCGTTTGAGCCTTCTGTAGGAAGGACACTTCACACAGGCACTAGCATAAAAGTTGAAATGGTTGGTGACActatcagtggaggctgttgaggggaggacggctcatattaatgtctggaatggaatcaaacataAGACAACCACGTGTCtgataccattccagccattattctgagccgtcctcccctcagcagcctccactgtcctGTATACATAGAAATACAGAGGGAGTGTTTCCACCCTCCCTAAATGTTTCCATTAGCCTTGCATAGTAGCATCACTCATATTTAATAAATGCaactctgtgtcccaaatggcaccctaatccatATGTAGTGCACATCTTTAGACTAGTGCCCATatagtgtagtgcactatatagggaatagggtgccatttgacacaCACAGTGAGGTCTTCCCTTTGGCCAAGTGGACTCCAATGATGTGTTTATATACAACGTATCTTTGTGTGTCTATATTTACCTACACACATCTATATGTGAATATGTACATCTATGCTTGTCTATGGTGGACTCAAGGTCACCATGGTGTCAACATTACATACAGTAAGTCTAAGGCACCGTCAACAAAGTATACCAGGGTTCTTGTTAAGGAGAAGTGCATAACATTTCCATAGAAGCCAGTCTTTAATGGATTCTACGTTTTCAGTCTTATCCTTTAATGGATTCTACGTTTGCTGTTTTCAGTCTTATCCTTTAAAGGATTCTACGTTTTCAGTCTTATCCTTTAATGGATTCTACGTCTGCTGTTTTCAGTCTTATCCTTTAAAGGATTCTACGTTTTCAGTCTTATCCTTTAATGGATTCTGTGTCTGCTGTTTTCAGTCTTATCCTTTAATGGATTCTACATCTGCTGTTTTCAGTCTTATCCTTTAAAGTCGCAATCAGccgttgaaacaataacaaaccgTCTCCCCACccgtttcggtaaaaagctgagggacggGGCTCAAACTCAAGAGTTATGGATacgaggactgaccatccatgatatcaaaattatagttaaccatgttgaggctaaatagtgtttgtttacatttactttgtttacaaacattggcgtAAACAATGCttgttttgggttctgatggggtacaacaatTGAACTAACCTCATGAGGAATTTATAAGttctattcttcaagaatcaattgaTACATATCATTAATATGTCCAAACATGTATCTGCAGGTTGCCACTTTAAAGAAGCAATTGATGAAATCACAAGTATTGTATTGTTATCAAGTGCTTAAGTTAGTCCTGTATGACTTACATTTAAAGTCAGTCAGATGATTTGAAGTAGTAATCTATGAAGTGCCAAAGCACACTTGGACCTTGGTGGACCGGAGCTATACAGCAGCCCTTGGTCgtgttcattagtgcacaccacaGCAAAACCTCTTGCAATGATAAACAAACTAAGCATTTGCCTGATGAAAACCTTCCAACTGTTTTACTTGTTTTGAAAGCAGTAACTCCCCTCAATGTACTCTGAACATTTAATGACTCTAGGACCAAGAAAATGTATTCAAAACAGCTTCTGAAGTTCGGTAATTGTGTGTTTGTTAATATGTAGCCggtttttcttccatttggtgcctaatgaacatgacccagctgCAACACTGAGGTTCCTGAAGTCAGTCTTGGCAGTAAGAGGATTTATTCATGAATGACTTTTCCCTTTAGTAGTACAAAGCAGGGAGTGGTCTGAGACTCAGAACGACTGATAGGAAACCCACTAAGTAATACAAACCATAGATGGCTTTATCTAGCGGCAGTGGAAGACTTCTGTTCTGATTCTCCCCCCTTTCCAGTGCACATGGTTCTAAAAGCACAGCACTGGTGTCAGGATTGGCTGTGAGGCTGGAGGGAGATTCCATTGTCAAAGCCATAGGGGGGGAAAGTAGGCCAGTGCAGTGCACGCTTTGGGAGAAGGGTGGACAATTGGGACTCTAATTTATCACCTGGTTTCAACCTATCCAATTGCTATAGTTTTTGTGGACAGTAGACATAAAAATATGACTGAAAACTGAATCAGTACATAAATGACTAGATAGGAACATGCATATTACACAGATCAGTTGAGCAAACAAGCCTGGTGTTTTCTACGGGCGGTTTAATTTAACGTGTGGTTTAATGAGCGGTTTAATGTGTTTTTTATGGCTTTACCTTGACTGTTATCAGATCGACAGGGTTTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1628559 False 4082 lncRNA 0.41 3 14573490 14577709
TU1628558 True 3113 lncRNA 0.40 3 14574466 14577709

Neighbor

gene id symbol gene type direction distance location
LOC110485503 LOC106593098 coding downstream 66553 14459338 ~ 14506937 (-)
LOC110493419 LOC106564347 coding downstream 190919 14379289 ~ 14382571 (-)
LOC110495053 LOC106564349 coding downstream 202403 14323005 ~ 14371087 (-)
LOC110485498 LOC106592261 coding downstream 229523 14293700 ~ 14343967 (-)
LOC110485493 LOC106592221 coding downstream 284331 14275862 ~ 14289159 (-)
tk1 kith coding upstream 662 14578371 ~ 14583460 (-)
ogal LOC106564358 coding upstream 50018 14627727 ~ 14647511 (-)
LOC110518890 LOC106591554 coding upstream 70133 14647842 ~ 14664571 (-)
LOC110494998 LOC106596103 coding upstream 330818 14908527 ~ 15433659 (-)
LOC118940322 LOC106598058 coding upstream 386023 14954929 ~ 15014095 (-)
G1422718 NA non-coding downstream 7894 14564964 ~ 14565596 (-)
G1422745 NA non-coding downstream 67495 14505781 ~ 14505995 (-)
G1422740 NA non-coding downstream 85711 14485920 ~ 14487779 (-)
G1422738 NA non-coding downstream 95096 14477370 ~ 14478394 (-)
G1422733 NA non-coding downstream 124588 14448296 ~ 14448902 (-)
G1422755 NA non-coding upstream 12023 14589732 ~ 14591384 (-)
G1422759 NA non-coding upstream 21631 14599340 ~ 14604988 (-)
G1422786 NA non-coding upstream 103688 14681397 ~ 14684923 (-)
G1422823 NA non-coding upstream 161664 14739373 ~ 14741530 (-)
G1422798 LOC106591328 non-coding upstream 177018 14754727 ~ 14757275 (-)
LOC110485459 LOC106564320 other downstream 608153 13959793 ~ 13997078 (-)
LOC118940029 exosc1 other downstream 704819 13863439 ~ 13868827 (-)
G1422125 LOC106595916 other downstream 715240 13856876 ~ 13858250 (-)
G1422757 NA other upstream 13757 14591466 ~ 14592594 (-)
G1422796 NA other upstream 187822 14765531 ~ 14768638 (-)
G1422891 LOC106601621 other upstream 348656 14907317 ~ 15353090 (-)
LOC118940320 LOC106605908 other upstream 429130 15003526 ~ 15247342 (-)
G1422897 NA other upstream 756169 15333878 ~ 15334891 (-)

Expression


Co-expression Network