XLOC_003363 (FP016142.2)


Basic Information

Item Value
gene id XLOC_003363
gene name FP016142.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 15799383 ~ 15801396 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006585
aacacttatatgtacataacgtcataaaaatacttgttttaattACCTCGCGCTGCCGTCCTTGAACTGCCGCGAACAGGAAATTCTGGGAATGGAGGACGGAGAGTTGAATCGATTCGTCTTCAACAAaccgatcagtgtgacatcaaaacatcgcgagaacaacagacagctccgTGTGCGTTAGAAATCCATCTcgcgatattgtatcacttcaggtacgcgcctactgatttgttgattcaaacgagttgtgaatcaagaagcctctaaagatccgaatcaaactgcagcagcacgccacgaggttttgctcagacttttGGGACGTTTGGAATTACTCCGTCTTGTCACAatgtaacacatagcagcaagacccatgggatttcatcagccactcaccatcagagtcctcagtggaagctgagaagagcagaagaggaagccaagcaagagatgccagaaaaaaagggggaaggaaataatgtgttattttgctgtttgagtataggcaggcgcagtgggtagcacaatcgcctcacagcaagaaggtcgctggttcgagcctcggctgggtcagttggcatttctgtgtggagtttgcatgttctccccatgttagcgtgggtttcctccgggtgctcccacaagtccaaaaatatgtggtgacattgggtaaggtaaaattgtccgtagtgtatgtgtgtgaatgagtatgtatggatgtttcccagtgatgggttgcagctgggtggcaacacggtggcacagtaggtagtgctgtttcctcacatcaagaaggt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098571

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006585 True 803 lncRNA 0.47 2 15799383 15801396

Neighbor

gene id symbol gene type direction distance location
XLOC_003362 FP016142.6 coding upstream 20132 15776072 ~ 15779251 (+)
XLOC_003361 gdf11 coding upstream 42998 15613218 ~ 15756385 (+)
XLOC_003360 cdk5rap1 coding upstream 212249 15480695 ~ 15587134 (+)
XLOC_003359 NA coding upstream 457970 15339344 ~ 15341413 (+)
XLOC_003358 CR550302.2 coding upstream 780859 15017185 ~ 15018524 (+)
XLOC_003364 FP003590.2 coding downstream 20037 15821433 ~ 15868456 (+)
XLOC_003365 pank4 coding downstream 76947 15878343 ~ 15915788 (+)
XLOC_003366 draxin coding downstream 129792 15931188 ~ 16013114 (+)
XLOC_003367 agtrap coding downstream 239121 16040517 ~ 16064291 (+)
XLOC_003368 ctbs coding downstream 269042 16070438 ~ 16083608 (+)
XLOC_003318 CR450764.6 misc upstream 3087387 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 3105120 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 3113784 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 3119355 12679732 ~ 12680028 (+)
XLOC_003314 CR450764.9 misc upstream 3175532 12623555 ~ 12623851 (+)
XLOC_003369 CR854846.2 misc downstream 321390 16122786 ~ 16123082 (+)
XLOC_003356 CU019562.2 non-coding upstream 894406 14902709 ~ 14904977 (+)
XLOC_003355 CU019562.3 non-coding upstream 935841 14862286 ~ 14863542 (+)
XLOC_003374 NA non-coding downstream 1291682 17093078 ~ 17170177 (+)
XLOC_003375 CR769769.1 non-coding downstream 1336452 17137848 ~ 17141887 (+)
XLOC_003376 CR631124.1 non-coding downstream 1527169 17328565 ~ 17328681 (+)
XLOC_003377 BX571952.1 non-coding downstream 1639195 17440591 ~ 17513632 (+)

Expression


Co-expression Network